Index

_ | A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Y

_

_CacheInfo (in module mpacts.core.units.compat.lrucache)
_check_add_and_set() (in module mpacts.commands.misc.stresscalculation)
_compare_points() (in module DEMutilities.postprocessing.analysistools.spatial.rdf)
_compile() (in module mpacts.core.units.compat.tokenize)
_dummyfunc() (in module DEMutilities.postprocessing.plottools.mplsphereplotter)
_eq() (in module mpacts.core.units.quantity)
_Exception (class in mpacts.core.units.quantity)
_Exception() (_Exception method)
_expression_to_function() (in module mpacts.core.units.context)
_get_normal_name() (in module mpacts.core.units.compat.tokenize)
_Group (class in mpacts.core.units.systems)
_Group() (_Group method)
_guess_processor_name() (in module mpacts.tools.system_info)
_HashedSeq (class in mpacts.core.units.compat.lrucache)
_HashedSeq() (_HashedSeq method)
_is_dim() (in module mpacts.core.units.util)
_is_ReuseExistingType() (in module mpacts.contact.matrix.frictionmatrix)
_join() (in module mpacts.core.units.formatting)
_make_key() (in module mpacts.core.units.compat.lrucache)
_Measurement (class in mpacts.core.units.measurement)
_Measurement() (_Measurement method)
_Meta (class in mpacts.core.units.registry)
_Meta() (_Meta method)
_parse_spec() (in module mpacts.core.units.formatting)
_parse_wrap_args() (in module mpacts.core.units.registry_helpers)
_pc_name_index() (in module mpacts.contact.matrix.conjugategradient)
_pretty_fmt_exponent() (in module mpacts.core.units.formatting)
_pythonify_entry() (in module DEMutilities.multisim_layout)
_Quantity (class in mpacts.core.units.quantity)
_Quantity() (_Quantity method)
_recursive_repr() (in module mpacts.core.units.compat.chainmap)
_replace_units() (in module mpacts.core.units.registry_helpers)
_Scale() (in module mpacts.commands.monitors.progress)
_smooth() (in module DEMutilities.postprocessing.representation.export_vtk)
_sort_pc_list_with_cd_order() (in module mpacts.contact.matrix.conjugategradient)
_System (class in mpacts.core.units.systems)
_System() (_System method)
_to_units_container() (in module mpacts.core.units.registry_helpers)
_tokenize() (in module mpacts.core.units.compat.tokenize)
_ToString() (in module mpacts.commands.monitors.progress)
_try_access_metadata() (in module DEMutilities.afmtools.import_afm_data)
_Unit (class in mpacts.core.units.unit)
_Unit() (_Unit method)

A

A_Determinator (class in DEMutilities.determine_hertz_dissipative_coefficient)
A_Determinator() (A_Determinator method)
aabb() (in module DEMutilities.numeric_functions)
(mpacts.geometrygenerators.meshobjects.MeshObject method)
AABBGeneratorCommand (class in mpacts.commands.geometry.aabbgenerator)
AABBGeneratorCommand() (AABBGeneratorCommand method)
aabbox() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
AbscissionCheck (class in mpacts.commands.misc.cellabscission)
AbscissionCheck() (AbscissionCheck method)
AbscissionCmds() (in module mpacts.commands.misc.cellabscission)
AbsorbCommand (class in mpacts.commands.misc.lighttransport)
AbsorbCommand() (AbsorbCommand method)
AbsorbLayerCommand (class in mpacts.commands.misc.lighttransport)
AbsorbLayerCommand() (AbsorbLayerCommand method)
AbsorbSphereCommand (class in mpacts.commands.misc.lighttransport)
AbsorbSphereCommand() (AbsorbSphereCommand method)
AcademicRepresentationSet (class in DEMutilities.postprocessing.representation.academic_representation)
AcademicRepresentationSet() (AcademicRepresentationSet method)
Accumulator (class in DEMutilities.postprocessing.operators.operators)
Accumulator() (Accumulator method)
(DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
Action (class in DEMutilities.postprocessing.operators.operators)
Action() (Action method)
(DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
ActionListLoader() (in module DEMutilities.GUI.Actions.ActionListLoader)
active() (mpacts.core.arrays.ArrayManager method)
add() (DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
(DEMutilities.postprocessing.operators.operators.AnalysisContainer.PostContainer method)
(mpacts.sparkicles.layoutcreator.layoutcreator method)
add_aabb_generators() (mpacts.contact.detectors.supercontactdetector.SuperContactDetectorAABB method)
add_after() (mpacts.core.baseobject.BaseObject method)
add_and_copy() (mpacts.commands.misc.cellabscission.DoAbscissionCmd method)
add_and_set_particles() (mpacts.particles.particlecontainer.ParticleContainer method)
add_array_if_not_there() (mpacts.sparkicles.layoutcreator.layoutcreator method)
add_background_decay() (mpacts.commands.continuum.compartmentmodeldiffusion.GridRD_2D method)
add_before() (mpacts.core.baseobject.BaseObject method)
add_child() (mpacts.core.baseobject.BaseObject method)
add_child_parent_relationship() (mpacts.sparkicles.layoutcreator.layoutcreator method)
add_commands() (mpacts.boundaryconditions.periodicboundary1D.PeriodicBoundary1D method)
add_connectivity() (mpacts.particles.particlebase.ParticleBase method)
add_contact() (mpacts.contact.detectors.onecontactpermodelcollector.OneContactPerModelCollector method)
add_contact_data() (mpacts.contact.matrix.cmtypes.CombinedContactDataMatrix method)
(mpacts.contact.matrix.cmtypes.CombinedOffDiagonalMatrix method)
add_contact_detector() (DEMutilities.postprocessing.analysistools.spatial.countcontacts.CountContactSpheres method)
(DEMutilities.postprocessing.analysistools.spatial.countcontacts.CountContactsWithMesh method)
add_contact_models() (DEMutilities.postprocessing.analysistools.spatial.rdf.RadialDistributionFunction method)
add_contactlist() (mpacts.contact.detectors.bending.BendingContactDetector method)
(mpacts.contact.detectors.fixedlist.FixedListContactDetector method)
(mpacts.contact.detectors.fixedlist.PrunedFixedListContactDetector method)
add_cps_rec() (in module DEMutilities.multisim_layout)
add_data() (DEMutilities.postprocessing.h5storage.H5DataSection method)
add_diffusion() (mpacts.commands.continuum.compartmentmodeldiffusion.GridRD_2D method)
add_element() (mpacts.core.arrays.ArrayManager method)
(mpacts.core.indextranslator.IndexTranslator method)
add_element_copy() (mpacts.core.arrays.ArrayManager method)
(mpacts.core.indextranslator.IndexTranslator method)
add_filament() (mpacts.particles.specialcases.filament.FilamentParticleContainer method)
add_full_repeat() (DEMutilities.doe_samples.FullFactorialDesign method)
(DEMutilities.doe_samples.LatinHyperCubeDesign method)
add_groups() (mpacts.core.units.systems._Group method)
(mpacts.core.units.systems._System method)
add_if_not_there() (mpacts.sparkicles.layoutcreator.layoutcreator method)
add_index_array() (mpacts.sparkicles.layoutcreator.layoutcreator method)
add_initialisers() (mpacts.particles.particlecontainer.ParticleContainer method)
add_mesh() (DEMutilities.postprocessing.analysistools.spatial.countcontacts.CountContactsWithMesh method)
(mpacts.commands.continuum.compartmentmodeldiffusion.GridRD_2D method)
add_motor() (mpacts.particles.specialcases.molecularmotor.MolecularMotorParticleContainer method)
add_mpacts_info() (DEMutilities.postprocessing.h5storage.H5Storage method)
add_nodes_triangles() (mpacts.commands.misc.cellabscission.AddNewNodesCmd method)
add_old_simulation_symbols() (in module DEMutilities.CheckpointedSimulation)
add_parameter() (DEMutilities.doe_samples.DesignBase method)
(DEMutilities.doe_samples.DirectSamplingDesign method)
(DEMutilities.doe_samples.FullFactorialDesign method)
(DEMutilities.doe_samples.LatinHyperCubeDesign method)
add_parameters_to_global() (DEMutilities.variables_from_files.VariableExtractor method)
add_particle() (mpacts.particles.particlecontainer.ParticleContainer method)
add_particle_exchange() (mpacts.commands.continuum.compartmentmodeldiffusion.GridRD_2D method)
add_particle_source() (mpacts.commands.continuum.compartmentmodeldiffusion.GridRD_2D method)
add_performance_info() (DEMutilities.postprocessing.h5storage.H5Storage method)
add_property() (mpacts.tools.pyProperties.pyProperties method)
add_samples_to_dataset() (in module DEMutilities.doe_samples)
add_simulation_info() (DEMutilities.postprocessing.h5storage.H5Storage method)
add_simulation_metrics() (DEMutilities.postprocessing.h5storage.H5Storage method)
add_species() (mpacts.commands.continuum.compartmentmodeldiffusion.GridRD_2D method)
add_system_info() (DEMutilities.postprocessing.h5storage.H5Storage method)
add_to() (mpacts.contact.matrix.cmoperators.ContactMatrixOperatorsBase method)
add_to_cell() (mpacts.core.mesh.MeshBase method)
add_to_existing() (mpacts.sparkicles.layoutcreator.layoutcreator static method)
add_transformation() (mpacts.core.units.context.Context method)
add_triangle() (mpacts.geometrygenerators.meshobjects.TriangleMeshObject method)
add_units() (mpacts.core.units.systems._Group method)
add_values_to_dataset() (in module DEMutilities.doe_samples)
add_vertex() (mpacts.geometrygenerators.meshobjects.TriangleMeshObject method)
AddAreaConservation() (in module mpacts.commands.force.constraints.areaconservation)
AddAreaConservationArrays() (in module mpacts.commands.force.constraints.areaconservation)
addCommandFtor (class in mpacts.particles.particlecontainer)
addCommandFtor() (addCommandFtor method)
AddConnectivitiesCmd (class in mpacts.commands.misc.cellabscission)
AddConnectivitiesCmd() (AddConnectivitiesCmd method)
addContact() (mpacts.contact.detectors.bending.BendingContactDetector method)
(mpacts.contact.detectors.fixedlist.FixedListContactDetector method)
(mpacts.contact.detectors.fixedlist.PrunedFixedListContactDetector method)
addCorner() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
addEdge() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
AddForcesToReferedParticleForcesCommand (class in mpacts.commands.force.constraints.virtualforces)
AddForcesToReferedParticleForcesCommand() (AddForcesToReferedParticleForcesCommand method)
AddForcesToReferedParticleTorquesCommand (class in mpacts.commands.force.constraints.virtualforces)
AddForcesToReferedParticleTorquesCommand() (AddForcesToReferedParticleTorquesCommand method)
Addition (class in mpacts.core.expression_cpp)
Addition() (Addition method)
AddNewNodesCmd (class in mpacts.commands.misc.cellabscission)
AddNewNodesCmd() (AddNewNodesCmd method)
AddNodeForcesToSegmentForcesCommand (class in mpacts.commands.force.constraints.virtualforces)
AddNodeForcesToSegmentForcesCommand() (AddNodeForcesToSegmentForcesCommand method)
AddNodeForcesToSegmentTorqueCommand (class in mpacts.commands.force.constraints.virtualforces)
AddNodeForcesToSegmentTorqueCommand() (AddNodeForcesToSegmentTorqueCommand method)
AddQuadNodeNormalCalculation() (in module mpacts.commands.geometry.normalcalculation)
AddQuadNodeNormalCalculationArrays() (in module mpacts.commands.geometry.normalcalculation)
AddStressCalculation() (in module mpacts.commands.misc.stresscalculation)
AddToDataFromGhostCommand (class in mpacts.commands.onarrays.transfer)
AddToDataFromGhostCommand() (AddToDataFromGhostCommand method)
addTriangle() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
AddTriangleNodeNormalCalculation() (in module mpacts.commands.geometry.normalcalculation)
AddTriangleNodeNormalCalculationArrays() (in module mpacts.commands.geometry.normalcalculation)
AddValueCommand (class in mpacts.commands.onarrays.setvalue)
AddValueCommand() (AddValueCommand method)
addVertex() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
addVertices() (mpacts.geometrygenerators.hexagonalclosepacking.HexagonalClosePacking method)
addVerticesCirc() (mpacts.geometrygenerators.boolean3Dshapegenerator.Boolean3DShapeGenerator method)
addVerticesCub() (mpacts.geometrygenerators.boolean3Dshapegenerator.Boolean3DShapeGenerator method)
addVerticesCyl() (mpacts.geometrygenerators.boolean3Dshapegenerator.Boolean3DShapeGenerator method)
(mpacts.geometrygenerators.hexagonalclosepacking.HexagonalClosePacking method)
addVerticesCylinder() (mpacts.geometrygenerators.cylinderpacking.CylinderPacking method)
addVerticesEllipseXY() (mpacts.geometrygenerators.boolean3Dshapegenerator.Boolean3DShapeGenerator method)
addVerticesSphere() (mpacts.geometrygenerators.boolean3Dshapegenerator.Boolean3DShapeGenerator method)
(mpacts.geometrygenerators.hexagonalclosepacking.HexagonalClosePacking method)
AddVolumeConservation() (in module mpacts.commands.force.constraints.volumeconservation)
AddVolumeConservationArrays() (in module mpacts.commands.force.constraints.volumeconservation)
AddVTKWriter() (DEMutilities.postprocessing.analysistools.spatial.clusters.ClusterAnalysis method)
advance_slice() (DEMutilities.postprocessing.operators.operators.SegmentedAnalysisReader method)
after_init() (mpacts.particles.particlebase.ParticleBase method)
after_loop() (DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
aliases (mpacts.core.units.definitions.Definition attribute)
alignAlongInertia() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
alignAlongInertiaAndReturnOrientation() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
alive() (mpacts.core.arrays.ArrayManager method)
ALLOWED_NAMES (DEMutilities.variables_from_files.StringToDictTransformer attribute)
ALLOWED_NODE_TYPES (DEMutilities.variables_from_files.StringToDictTransformer attribute)
AnalysisContainer (class in DEMutilities.postprocessing.operators.operators)
AnalysisContainer() (AnalysisContainer method)
AnalysisContainer.PostContainer (class in DEMutilities.postprocessing.operators.operators)
analyze_parallel() (in module DEMutilities.analyze_parameter_study)
AnalyzeClusters() (DEMutilities.postprocessing.analysistools.spatial.clusters.ClusterAnalysis method)
AND() (in module mpacts.predicates.shortened_predicates)
AndGates (class in mpacts.core.command)
AndGates() (AndGates method)
angle_to_quaternion() (in module mpacts.geometrygenerators.transformations)
anglebetweenvectors() (in module DEMutilities.numeric_functions)
any() (in module mpacts.core.units.compat.tokenize)
AppliedForceCommand (class in mpacts.commands.force.body)
AppliedForceCommand() (AppliedForceCommand method)
AppliedPressureCommand (class in mpacts.commands.force.body)
AppliedPressureCommand() (AppliedPressureCommand method)
apply_function_on_data_axis() (DEMutilities.postprocessing.h5storage.H5DataSection method)
apply_function_to_cmap() (in module DEMutilities.postprocessing.representation.cmap_tools)
apply_function_to_data() (DEMutilities.postprocessing.h5storage.H5DataSection method)
apply_slice() (mpacts.io.datareader.DataFrameReader method)
(mpacts.io.datasave_new.DataFrameReader method)
ArchimedesForceTriangleCommand (class in mpacts.commands.force.body)
ArchimedesForceTriangleCommand() (ArchimedesForceTriangleCommand method)
area() (mpacts.geometrygenerators.meshobjects.MeshObject method)
AreaConservation() (in module mpacts.commands.force.constraints.areaconservation)
Array (class in mpacts.core.arrays)
Array() (Array method)
Array_ArrayManagers (class in mpacts.core.arrays)
Array_ArrayManagers() (Array_ArrayManagers method)
array_at_vilidx() (in module DEMutilities.numeric_functions)
Array_BaseObjects (class in mpacts.core.arrays)
Array_BaseObjects() (Array_BaseObjects method)
Array_ContactDataStorage (class in mpacts.core.arrays)
Array_ContactDataStorage() (Array_ContactDataStorage method)
Array_ContactModel (class in mpacts.core.arrays)
Array_ContactModel() (Array_ContactModel method)
Array_Index (class in mpacts.core.arrays)
Array_Index() (Array_Index method)
Array_Int (class in mpacts.core.arrays)
Array_Int() (Array_Int method)
Array_LineIndex (class in mpacts.core.arrays)
Array_LineIndex() (Array_LineIndex method)
Array_LongIndex (class in mpacts.core.arrays)
Array_LongIndex() (Array_LongIndex method)
Array_LUT2Scalar (class in mpacts.core.arrays)
Array_LUT2Scalar() (Array_LUT2Scalar method)
Array_Matrix (class in mpacts.core.arrays)
Array_Matrix() (Array_Matrix method)
Array_Point (class in mpacts.core.arrays)
Array_Point() (Array_Point method)
Array_QuadIndex (class in mpacts.core.arrays)
Array_QuadIndex() (Array_QuadIndex method)
Array_Quaternion (class in mpacts.core.arrays)
Array_Quaternion() (Array_Quaternion method)
Array_Scalar (class in mpacts.core.arrays)
Array_Scalar() (Array_Scalar method)
Array_String (class in mpacts.core.arrays)
Array_String() (Array_String method)
Array_SymmetricMatrix (class in mpacts.core.arrays)
Array_SymmetricMatrix() (Array_SymmetricMatrix method)
array_to_numpy() (in module mpacts.tools.arrayoperators)
Array_TriangleIndex (class in mpacts.core.arrays)
Array_TriangleIndex() (Array_TriangleIndex method)
Array_UnsignedLong (class in mpacts.core.arrays)
Array_UnsignedLong() (Array_UnsignedLong method)
Array_Vector (class in mpacts.core.arrays)
Array_Vector() (Array_Vector method)
Array_VectorIndex (class in mpacts.core.arrays)
Array_VectorIndex() (Array_VectorIndex method)
ArrayAtIndexPrinter (class in mpacts.commands.monitors.progress)
ArrayAtIndexPrinter() (ArrayAtIndexPrinter method)
ArrayBoundsPrinter (class in mpacts.commands.monitors.progress)
ArrayBoundsPrinter() (ArrayBoundsPrinter method)
ArrayDataSaver (class in mpacts.io.serial_encoder_decoder)
(class in mpacts.io.serial_encoder_decoder_new)
ArrayDataSaver() (ArrayDataSaver method), [1]
ArrayManager (class in mpacts.core.arrays)
ArrayManager() (ArrayManager method)
ArrayMaxMagnitudePrinter (class in mpacts.commands.monitors.progress)
ArrayMaxMagnitudePrinter() (ArrayMaxMagnitudePrinter method)
ArrayMaxPrinter (class in mpacts.commands.monitors.progress)
ArrayMaxPrinter() (ArrayMaxPrinter method)
ArrayMeanPrinter (class in mpacts.commands.monitors.progress)
ArrayMeanPrinter() (ArrayMeanPrinter method)
ArrayMinPrinter (class in mpacts.commands.monitors.progress)
ArrayMinPrinter() (ArrayMinPrinter method)
ArraySumPrinter (class in mpacts.commands.monitors.progress)
ArraySumPrinter() (ArraySumPrinter method)
ArrayValue (class in mpacts.core.expression_cpp)
ArrayValue() (ArrayValue method)
asimulation (DEMutilities.CheckpointedSimulation.CheckpointedSimulation attribute)
AssembleCylinderFrictionCoefficientsCommand (class in mpacts.commands.misc.frictionmatrices)
AssembleCylinderFrictionCoefficientsCommand() (AssembleCylinderFrictionCoefficientsCommand method)
AssembleCylinderRotationalFrictionCoefficientsCommand (class in mpacts.commands.misc.frictionmatrices)
AssembleCylinderRotationalFrictionCoefficientsCommand() (AssembleCylinderRotationalFrictionCoefficientsCommand method)
AssembleInverseFrictionMatrixCommand (class in mpacts.commands.misc.frictionmatrices)
AssembleInverseFrictionMatrixCommand() (AssembleInverseFrictionMatrixCommand method)
AssembleInverseRotationalFrictionMatrixCommand (class in mpacts.commands.misc.frictionmatrices)
AssembleInverseRotationalFrictionMatrixCommand() (AssembleInverseRotationalFrictionMatrixCommand method)
assert_data() (DEMutilities.postprocessing.h5storage.H5Entry method)
assert_write_mode() (DEMutilities.postprocessing.h5storage.H5BaseEntry method)
Assign (class in mpacts.core.expression_cpp)
Assign() (Assign method)
ast_unserialise_data() (in module mpacts.io.save_load)
asym() (mpacts.core.new_units.QuantityMatrix method)
(mpacts.core.new_units.QuantitySymmetricMatrix method)
AttrView (class in DEMutilities.postprocessing.dataview)
AttrView() (AttrView method)
autoAddCornersAndEdges() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
AverageSegmentValueFromNodesCommand (class in mpacts.commands.onarrays.transfer)
AverageSegmentValueFromNodesCommand() (AverageSegmentValueFromNodesCommand method)
AverageSegmentValueFromNodesForSymmetricMatrixCommand (class in mpacts.commands.onarrays.transfer)
AverageSegmentValueFromNodesForSymmetricMatrixCommand() (AverageSegmentValueFromNodesForSymmetricMatrixCommand method)
AverageSegmentValueFromNodesForVectorCommand (class in mpacts.commands.onarrays.transfer)
AverageSegmentValueFromNodesForVectorCommand() (AverageSegmentValueFromNodesForVectorCommand method)

B

bar() (in module DEMutilities.relaxcontacts)
bars() (DEMutilities.postprocessing.representation.academic_representation.AcademicRepresentationSet method)
bars_power_row() (DEMutilities.postprocessing.representation.cnh_specific_representation.CNH_Specific_RepresentationSet method)
bars_power_se() (DEMutilities.postprocessing.representation.cnh_specific_representation.CNH_Specific_RepresentationSet method)
barycenter_radius() (in module mpacts.geometrygenerators.polyhedron)
base_units (mpacts.core.units.systems._System attribute)
BaseContainer (class in DEMutilities.postprocessing.operators.operators)
BaseContainer() (BaseContainer method)
BaseObject (class in mpacts.core.baseobject)
BaseObject() (BaseObject method)
BendingContactDetector (class in mpacts.contact.detectors.bending)
BendingContactDetector() (BendingContactDetector method)
BeyondEdge (class in mpacts.predicates.lighttransport_predicates)
BeyondEdge() (BeyondEdge method)
bin_centers() (in module DEMutilities.numeric_functions)
bin_midpoints() (in module DEMutilities.numeric_functions)
BinaryFissionCommand (class in mpacts.commands.misc.cellcycle)
BinaryFissionCommand() (BinaryFissionCommand method)
BindingReaction (class in mpacts.commands.misc.molecularreactions)
BindingReaction() (BindingReaction method)
block_iter() (mpacts.core.units.util.SourceIterator method)
BlockIterator (class in mpacts.core.units.util)
BlockIterator() (BlockIterator method)
bo_get_state() (mpacts.core.baseobject.BaseObject method)
bo_set_state() (mpacts.core.baseobject.BaseObject method)
Boolean3DShapeGenerator (class in mpacts.geometrygenerators.boolean3Dshapegenerator)
Boolean3DShapeGenerator() (Boolean3DShapeGenerator method)
box_distance_to_border() (in module mpacts.tools.arrayoperators)
BrownianForceCommand (class in mpacts.commands.force.random)
BrownianForceCommand() (BrownianForceCommand method)
BrownianRotationalForcesCommand (class in mpacts.commands.force.random)
BrownianRotationalForcesCommand() (BrownianRotationalForcesCommand method)
BrownianTranslationForcesCommand (class in mpacts.commands.force.random)
BrownianTranslationForcesCommand() (BrownianTranslationForcesCommand method)
BruteForceAABB (class in mpacts.contact.detectors.bruteforceaabb)
BruteForceAABB() (BruteForceAABB method)
BruteForceAABB_CD (class in mpacts.contact.detectors.bruteforceaabb_cd)
BruteForceAABB_CD() (BruteForceAABB_CD method)
build_eval_tree() (in module mpacts.core.units.units_eval)
build_group_class() (in module mpacts.core.units.systems)
build_measurement_class() (in module mpacts.core.units.measurement)
build_quantity_class() (in module mpacts.core.units.quantity)
build_system_class() (in module mpacts.core.units.systems)
build_unit_class() (in module mpacts.core.units.unit)
BuoyancyForceCommand (class in mpacts.commands.force.body)
BuoyancyForceCommand() (BuoyancyForceCommand method)
butter_highpass() (in module DEMutilities.postprocessing.analysistools.temporal.fourier)
byteify() (in module mpacts.io.datareader)

C

calc_A_B() (in module mpacts.contact.models.deprecated.ellipsoid_contact_force)
calc_bandwidth() (in module mpacts.geometrygenerators.polyhedron)
calc_F() (DEMutilities.determine_hertz_dissipative_coefficient.A_Determinator method)
calculate_bandwidths() (mpacts.commands.misc.optimizebandwidth.OptimizeBandwidth method)
CalculateActomyosinConcentrationCommand (class in mpacts.commands.misc.actomyosinconcentration)
CalculateActomyosinConcentrationCommand() (CalculateActomyosinConcentrationCommand method)
CalculateAvDistances() (mpacts.commands.misc.cellabscission.AbscissionCheck method)
CalculateCurrentActomyosinConcentrationCommand (class in mpacts.commands.misc.actomyosinconcentration)
CalculateCurrentActomyosinConcentrationCommand() (CalculateCurrentActomyosinConcentrationCommand method)
CalculateCurvatureOnce() (in module mpacts.commands.geometry.curvature)
call_h5_item() (in module DEMutilities.postprocessing.h5storage)
cast_to_intermediate() (mpacts.core.baseobject.BaseObject method)
categorical_heatmap() (DEMutilities.postprocessing.representation.cnh_specific_representation.CNH_Specific_RepresentationSet method)
CellDeathCommand (class in mpacts.commands.misc.cellcycle)
CellDeathCommand() (CellDeathCommand method)
CellFrontCommand (class in mpacts.commands.misc.lamellipodiumfront)
CellFrontCommand() (CellFrontCommand method)
CellFrontTipCommand (class in mpacts.commands.misc.lamellipodiumfront)
CellFrontTipCommand() (CellFrontTipCommand method)
CellFrontTipCommandM (class in mpacts.commands.misc.lamellipodiumfront)
CellFrontTipCommandM() (CellFrontTipCommandM method)
center() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
center_of_mass() (mpacts.geometrygenerators.meshobjects.MeshObject method)
centers() (mpacts.geometrygenerators.meshobjects.MeshObject method)
CentralGravityCommand (class in mpacts.commands.force.body)
CentralGravityCommand() (CentralGravityCommand method)
CentralPullCommand (class in mpacts.commands.force.body)
CentralPullCommand() (CentralPullCommand method)
CentrifugalTorqueCommand (class in mpacts.commands.force.body)
CentrifugalTorqueCommand() (CentrifugalTorqueCommand method)
CentrifugationForceCommand (class in mpacts.commands.force.body)
CentrifugationForceCommand() (CentrifugationForceCommand method)
CFDDragForceCommand (class in mpacts.commands.force.body)
CFDDragForceCommand() (CFDDragForceCommand method)
CG_Matrix_Iface (class in mpacts.contact.matrix.cmtypes)
CG_Matrix_Iface() (CG_Matrix_Iface method)
CG_Vector_Iface (class in mpacts.contact.matrix.cmtypes)
CG_Vector_Iface() (CG_Vector_Iface method)
ChainOfCapsulesConstrainsCommand (class in mpacts.commands.force.constraints.virtualforces)
ChainOfCapsulesConstrainsCommand() (ChainOfCapsulesConstrainsCommand method)
ChainOfCapsulesConstrainsSparseSolverCommand (class in mpacts.commands.force.constraints.virtualforces)
ChainOfCapsulesConstrainsSparseSolverCommand() (ChainOfCapsulesConstrainsSparseSolverCommand method)
ChangeAxisYZ() (mpacts.geometrygenerators.hexagonalclosepacking.HexagonalClosePacking method)
check() (in module mpacts.core.units.registry_helpers)
(mpacts.commands.monitors.progress.FixedNumberOfStepsCondition method)
(mpacts.commands.monitors.progress.TimeIntervalCondition method)
(mpacts.predicates.predicates.PredicateBase method)
check_and_document_hash() (in module mpacts.tools.arrayhash)
check_edge_in_triangle() (in module mpacts.geometrygenerators.trianglegeometries)
check_gate() (mpacts.core.command.CommandGateBase method)
check_kwargs_() (mpacts.particles.particlecontainer.ParticleContainer method)
check_or_add() (mpacts.commands.geometry.curvature.tmpKeeper method)
check_orthogonality() (in module mpacts.boundaryconditions.rigid_body_constraints)
check_required_properties() (mpacts.core.baseobject.BaseObject method)
Check_safety_margins_set_Nadjusted() (in module mpacts.geometrygenerators.pointgenerators)
checker_all() (in module DEMutilities.enumerate_properties)
checker_all_R3() (in module DEMutilities.enumerate_properties)
checker_only_float() (in module DEMutilities.enumerate_properties)
CheckInSphere (class in mpacts.predicates.lighttransport_predicates)
CheckInSphere() (CheckInSphere method)
CheckpointedSimulation (class in DEMutilities.CheckpointedSimulation)
CheckpointedSimulation() (CheckpointedSimulation method)
ChemModulatedGrowthCommand (class in mpacts.commands.misc.cellcycle)
ChemModulatedGrowthCommand() (ChemModulatedGrowthCommand method)
clean_header() (in module DEMutilities.analyze_parameter_study)
cleanLists() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
clear() (mpacts.core.arrays.Array method)
(mpacts.core.arrays.ArrayManager method)
(mpacts.core.contactdata.ContactDataBase method)
(mpacts.predicates.predicates.PredicateAction_StoreElement method)
(mpacts.predicates.predicates.PredicateAction_StoreParticleElements method)
clear_tmps() (mpacts.commands.geometry.curvature.tmpKeeper method)
clip() (mpacts.core.units.quantity._Quantity method)
ClipLeapFrogVelocityAndAdjustPositionCommand (class in mpacts.commands.onarrays.setvalue)
ClipLeapFrogVelocityAndAdjustPositionCommand() (ClipLeapFrogVelocityAndAdjustPositionCommand method)
ClipValueCommand (class in mpacts.commands.onarrays.setvalue)
ClipValueCommand() (ClipValueCommand method)
ClipWithArrayCommand (class in mpacts.commands.onarrays.setvalue)
ClipWithArrayCommand() (ClipWithArrayCommand method)
close() (DEMutilities.postprocessing.h5storage.H5Storage method)
(DEMutilities.postprocessing.h5storage.HdfFrameReader method)
(DEMutilities.postprocessing.representation.academic_representation.AcademicRepresentationSet method)
(DEMutilities.postprocessing.representation.cnh_specific_representation.CNH_Specific_RepresentationSet method)
(DEMutilities.postprocessing.representation.representationbase.RepresentationSetBase method)
closest_index() (in module DEMutilities.numeric_functions)
closest_vertex() (mpacts.geometrygenerators.meshobjects.MeshObject method)
ClusterAnalysis (class in DEMutilities.postprocessing.analysistools.spatial.clusters)
ClusterAnalysis() (ClusterAnalysis method)
ClusterFraction() (DEMutilities.postprocessing.analysistools.spatial.clusters.ClusterAnalysis method)
cmap_to_list() (in module DEMutilities.postprocessing.representation.cmap_tools)
CNH_Specific_RepresentationSet (class in DEMutilities.postprocessing.representation.cnh_specific_representation)
CNH_Specific_RepresentationSet() (CNH_Specific_RepresentationSet method)
CohesionSplineAkinci3D (class in mpacts.core.smoothingkernels)
CohesionSplineAkinci3D() (CohesionSplineAkinci3D method)
column_echelon_form() (in module mpacts.core.units.util)
combine() (mpacts.particles.particlebase.ParticleBase class method)
combine_triangle_meshes() (in module mpacts.geometrygenerators.trianglegeometries)
CombinedArray (class in mpacts.contact.matrix.cmtypes)
CombinedArray() (CombinedArray method)
CombinedContactDataMatrix (class in mpacts.contact.matrix.cmtypes)
CombinedContactDataMatrix() (CombinedContactDataMatrix method)
CombinedContactDataStorage (class in mpacts.contact.storage.factory_dummy)
CombinedContactDataStorage() (CombinedContactDataStorage method)
CombinedDiagonalMatrix (class in mpacts.contact.matrix.cmtypes)
CombinedDiagonalMatrix() (CombinedDiagonalMatrix method)
CombinedOffDiagonalMatrix (class in mpacts.contact.matrix.cmtypes)
CombinedOffDiagonalMatrix() (CombinedOffDiagonalMatrix method)
Command (class in mpacts.core.command)
Command() (Command method)
CommandGateBase (class in mpacts.core.command)
CommandGateBase() (CommandGateBase method)
CommandList (class in mpacts.core.command)
CommandList() (CommandList method)
CommandListConverter (class in DEMutilities.commandlist_converter)
CommandListConverter() (CommandListConverter method)
compare() (mpacts.core.units.quantity._Quantity method)
(mpacts.core.units.unit._Unit method)
Comparison (class in DEMutilities.postprocessing.operators.operators)
Comparison() (Comparison method)
(DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
comparitive_bars() (DEMutilities.postprocessing.representation.cnh_specific_representation.CNH_Specific_RepresentationSet method)
compatible_units() (mpacts.core.units.quantity._Quantity method)
(mpacts.core.units.unit._Unit method)
compatible_with() (mpacts.core.new_units.Unit method)
CompensateSphereRadiusForLostVolumeCommand (class in mpacts.commands.geometry.sphere)
CompensateSphereRadiusForLostVolumeCommand() (CompensateSphereRadiusForLostVolumeCommand method)
compiler_info() (in module mpacts.core.configuration)
compounded_name() (in module mpacts.io.datasave)
(in module mpacts.io.datasave_new)
compute_A() (DEMutilities.determine_hertz_dissipative_coefficient.A_Determinator method)
compute_bounds() (DEMutilities.postprocessing.plottools.mplsphereplotter.SpherePlotter method)
compute_count() (DEMutilities.postprocessing.analysistools.spatial.rdf.RadialDistributionFunction method)
compute_edge_midpoints() (DEMutilities.postprocessing.analysistools.spatial.rdf.RadialDistributionFunction method)
compute_friction_forces() (in module mpacts.contact.matrix.pythontools)
compute_structure_factor() (DEMutilities.postprocessing.analysistools.spatial.structurefactor.StructureFactor method)
compute_structure_factor_array() (DEMutilities.postprocessing.analysistools.spatial.structurefactor.StructureFactor method)
ComputeActiveIonTransportCommand (class in mpacts.commands.force.constraints.changevolume)
ComputeActiveIonTransportCommand() (ComputeActiveIonTransportCommand method)
ComputeArrayGlobalVolumeForceCommand (class in mpacts.commands.force.constraints.volumeforce)
ComputeArrayGlobalVolumeForceCommand() (ComputeArrayGlobalVolumeForceCommand method)
ComputeChildListPerParentCommand (class in mpacts.commands.onparticles.countperparent)
ComputeChildListPerParentCommand() (ComputeChildListPerParentCommand method)
ComputeCurvatureCommand (class in mpacts.commands.geometry.triangle)
ComputeCurvatureCommand() (ComputeCurvatureCommand method)
ComputeCurvatureOfMesh() (in module mpacts.commands.geometry.curvature)
ComputeCurvatureOnceCommand (class in mpacts.commands.geometry.curvature)
ComputeCurvatureOnceCommand() (ComputeCurvatureOnceCommand method)
ComputeCylinderCenter (class in mpacts.commands.geometry.cylinder)
ComputeCylinderCenter() (ComputeCylinderCenter method)
ComputeCylinderIndexListCommand (class in mpacts.commands.geometry.cylinder)
ComputeCylinderIndexListCommand() (ComputeCylinderIndexListCommand method)
ComputeDamageCommand (class in mpacts.commands.misc.damage_estimation)
ComputeDamageCommand() (ComputeDamageCommand method)
ComputeDeformableCylinderAxisAndLengthCommand (class in mpacts.commands.geometry.cylinder)
ComputeDeformableCylinderAxisAndLengthCommand() (ComputeDeformableCylinderAxisAndLengthCommand method)
ComputeDensityCommand (class in DEMutilities.postprocessing.analysistools.spatial.bintogrid)
ComputeDensityCommand() (ComputeDensityCommand method)
ComputeEdgeCommand (class in mpacts.commands.geometry.triangle)
ComputeEdgeCommand() (ComputeEdgeCommand method)
ComputeEnclosedAreaCommand (class in mpacts.commands.geometry.cylinder)
ComputeEnclosedAreaCommand() (ComputeEnclosedAreaCommand method)
ComputeEncompassingSphereCommand (class in mpacts.commands.geometry.triangle)
ComputeEncompassingSphereCommand() (ComputeEncompassingSphereCommand method)
ComputeForcesFromSegmentForcesAndTorqueCommand (class in mpacts.commands.force.constraints.virtualforces)
ComputeForcesFromSegmentForcesAndTorqueCommand() (ComputeForcesFromSegmentForcesAndTorqueCommand method)
ComputeFreeDirectionCommand (class in mpacts.commands.geometry.freedirection)
ComputeFreeDirectionCommand() (ComputeFreeDirectionCommand method)
ComputeGaussianCurvatureCommand (class in mpacts.commands.geometry.triangle)
ComputeGaussianCurvatureCommand() (ComputeGaussianCurvatureCommand method)
ComputeGlobalAreaForceCommand (class in mpacts.commands.force.constraints.areaforce)
ComputeGlobalAreaForceCommand() (ComputeGlobalAreaForceCommand method)
ComputeGlobalVolumeForceCommand (class in mpacts.commands.force.constraints.volumeforce)
ComputeGlobalVolumeForceCommand() (ComputeGlobalVolumeForceCommand method)
ComputeHingeOutwardNormalsCommand (class in mpacts.commands.geometry.cylinder)
ComputeHingeOutwardNormalsCommand() (ComputeHingeOutwardNormalsCommand method)
ComputeIndexSumCommand (class in mpacts.commands.onarrays.average)
ComputeIndexSumCommand() (ComputeIndexSumCommand method)
ComputeIntSumCommand (class in mpacts.commands.onarrays.average)
ComputeIntSumCommand() (ComputeIntSumCommand method)
ComputeKineticEnergyCommand (class in mpacts.commands.onparticles.kinetic_energy)
ComputeKineticEnergyCommand() (ComputeKineticEnergyCommand method)
ComputeLocalDiameterCommand (class in mpacts.commands.geometry.quad)
(class in mpacts.commands.geometry.triangle)
ComputeLocalDiameterCommand() (ComputeLocalDiameterCommand method), [1]
ComputeMatrixSumCommand (class in mpacts.commands.onarrays.average)
ComputeMatrixSumCommand() (ComputeMatrixSumCommand method)
ComputeNodeNormalsCommand (class in mpacts.commands.geometry.nodenormals)
ComputeNodeNormalsCommand() (ComputeNodeNormalsCommand method)
ComputeNodeStrainCommand (class in mpacts.commands.geometry.triangle)
ComputeNodeStrainCommand() (ComputeNodeStrainCommand method)
ComputeNodeValuesFromTrianglesCommand (class in mpacts.commands.onarrays.transfer)
ComputeNodeValuesFromTrianglesCommand() (ComputeNodeValuesFromTrianglesCommand method)
ComputeNodeVolumeForceCommand (class in mpacts.commands.force.constraints.volumeforce)
ComputeNodeVolumeForceCommand() (ComputeNodeVolumeForceCommand method)
ComputeNormalPressureCommand (class in mpacts.commands.misc.damage_estimation)
ComputeNormalPressureCommand() (ComputeNormalPressureCommand method)
ComputeOptimizedStepSizeLayerCommand (class in mpacts.commands.misc.lighttransport)
ComputeOptimizedStepSizeLayerCommand() (ComputeOptimizedStepSizeLayerCommand method)
ComputeOrientationCommand (class in mpacts.commands.geometry.orientation)
ComputeOrientationCommand() (ComputeOrientationCommand method)
ComputePassiveIonTransportCommand (class in mpacts.commands.force.constraints.changevolume)
ComputePassiveIonTransportCommand() (ComputePassiveIonTransportCommand method)
ComputePointSumCommand (class in mpacts.commands.onarrays.average)
ComputePointSumCommand() (ComputePointSumCommand method)
ComputePrincipalCurvaturesCommand (class in mpacts.commands.geometry.triangle)
ComputePrincipalCurvaturesCommand() (ComputePrincipalCurvaturesCommand method)
ComputeQuadCentersCommand (class in mpacts.commands.geometry.quad)
ComputeQuadCentersCommand() (ComputeQuadCentersCommand method)
ComputeQuadIndexListCommand (class in mpacts.commands.geometry.quad)
ComputeQuadIndexListCommand() (ComputeQuadIndexListCommand method)
ComputeQuadNodeNormalsCommand (class in mpacts.commands.geometry.nodenormals)
ComputeQuadNodeNormalsCommand() (ComputeQuadNodeNormalsCommand method)
ComputeQuadNormalsCommand (class in mpacts.commands.geometry.quad)
ComputeQuadNormalsCommand() (ComputeQuadNormalsCommand method)
ComputeScalarSumCommand (class in mpacts.commands.onarrays.average)
ComputeScalarSumCommand() (ComputeScalarSumCommand method)
ComputeSegmentAxisCommand (class in mpacts.commands.geometry.cylinder)
ComputeSegmentAxisCommand() (ComputeSegmentAxisCommand method)
ComputeSegmentLengthCommand (class in mpacts.commands.geometry.cylinder)
ComputeSegmentLengthCommand() (ComputeSegmentLengthCommand method)
ComputeSimplyWeightedNodeNormalsCommand (class in mpacts.commands.geometry.nodenormals)
ComputeSimplyWeightedNodeNormalsCommand() (ComputeSimplyWeightedNodeNormalsCommand method)
ComputeSphereRadiusFromVolumeCommand (class in mpacts.commands.geometry.sphere)
ComputeSphereRadiusFromVolumeCommand() (ComputeSphereRadiusFromVolumeCommand method)
ComputeSphereSkinSurfaceMeshCommand (class in mpacts.commands.misc.skinsurfacemesh)
ComputeSphereSkinSurfaceMeshCommand() (ComputeSphereSkinSurfaceMeshCommand method)
ComputeSphereVolumeFromRadiusCommand (class in mpacts.commands.geometry.sphere)
ComputeSphereVolumeFromRadiusCommand() (ComputeSphereVolumeFromRadiusCommand method)
ComputeStepSizeCommand (class in mpacts.commands.misc.lighttransport)
ComputeStepSizeCommand() (ComputeStepSizeCommand method)
ComputeStructureFactorCommand (class in mpacts.commands.misc.structurefactor)
ComputeStructureFactorCommand() (ComputeStructureFactorCommand method)
ComputeSubmergedTriangleNodeStiffnessCommand (class in mpacts.commands.misc.stiffness)
ComputeSubmergedTriangleNodeStiffnessCommand() (ComputeSubmergedTriangleNodeStiffnessCommand method)
ComputeSubmergedVolumeQuadPolyhedronCommand (class in mpacts.commands.geometry.submergedvolume)
ComputeSubmergedVolumeQuadPolyhedronCommand() (ComputeSubmergedVolumeQuadPolyhedronCommand method)
ComputeSubmergedVolumeSimonAttempt (class in mpacts.commands.geometry.submergedvolume)
ComputeSubmergedVolumeSimonAttempt() (ComputeSubmergedVolumeSimonAttempt method)
ComputeSubmergedVolumeSphereCommand (class in mpacts.commands.geometry.submergedvolume)
ComputeSubmergedVolumeSphereCommand() (ComputeSubmergedVolumeSphereCommand method)
ComputeSubmergedVolumeTriangulatedPolyhedronCommand (class in mpacts.commands.geometry.submergedvolume)
ComputeSubmergedVolumeTriangulatedPolyhedronCommand() (ComputeSubmergedVolumeTriangulatedPolyhedronCommand method)
ComputeSurfaceTensionCommand (class in mpacts.commands.force.constraints.areaforce)
ComputeSurfaceTensionCommand() (ComputeSurfaceTensionCommand method)
ComputeSymmetricMatrixSumCommand (class in mpacts.commands.onarrays.average)
ComputeSymmetricMatrixSumCommand() (ComputeSymmetricMatrixSumCommand method)
ComputeTriangleAreaForceCMSCommand (class in mpacts.commands.force.constraints.areaforce)
ComputeTriangleAreaForceCMSCommand() (ComputeTriangleAreaForceCMSCommand method)
ComputeTriangleAreaForceCommand (class in mpacts.commands.force.constraints.areaforce)
ComputeTriangleAreaForceCommand() (ComputeTriangleAreaForceCommand method)
ComputeTriangleAreaNonlinearForceCommand (class in mpacts.commands.force.constraints.areaforce)
ComputeTriangleAreaNonlinearForceCommand() (ComputeTriangleAreaNonlinearForceCommand method)
ComputeTriangleCentersCommand (class in mpacts.commands.geometry.triangle)
ComputeTriangleCentersCommand() (ComputeTriangleCentersCommand method)
ComputeTriangleIndexListCommand (class in mpacts.commands.geometry.triangle)
ComputeTriangleIndexListCommand() (ComputeTriangleIndexListCommand method)
ComputeTriangleNormalsCommand (class in mpacts.commands.geometry.triangle)
ComputeTriangleNormalsCommand() (ComputeTriangleNormalsCommand method)
ComputeTriangleValuesFromNodesCommand (class in mpacts.commands.onarrays.transfer)
ComputeTriangleValuesFromNodesCommand() (ComputeTriangleValuesFromNodesCommand method)
ComputeVectorSumCommand (class in mpacts.commands.onarrays.average)
ComputeVectorSumCommand() (ComputeVectorSumCommand method)
ComputeVelocitiesFromSegmentForcesAndTorque (class in mpacts.commands.time_evolution.integration)
ComputeVelocitiesFromSegmentForcesAndTorque() (ComputeVelocitiesFromSegmentForcesAndTorque method)
ComputeViscousVolumeChangeCommand (class in mpacts.commands.misc.volumechange)
ComputeViscousVolumeChangeCommand() (ComputeViscousVolumeChangeCommand method)
ComputeVolumeCommand (class in mpacts.commands.geometry.triangle)
ComputeVolumeCommand() (ComputeVolumeCommand method)
ComputeVolumeRegulationCommand (class in mpacts.commands.force.constraints.changevolume)
ComputeVolumeRegulationCommand() (ComputeVolumeRegulationCommand method)
ComputeWaterFluxCommand (class in mpacts.commands.force.constraints.changevolume)
ComputeWaterFluxCommand() (ComputeWaterFluxCommand method)
ComputeWeightedNodeNormalsCommand (class in mpacts.commands.geometry.nodenormals)
ComputeWeightedNodeNormalsCommand() (ComputeWeightedNodeNormalsCommand method)
ConcaveCentripetalForceCommand (class in mpacts.commands.force.body)
ConcaveCentripetalForceCommand() (ConcaveCentripetalForceCommand method)
ConceptBase (class in mpacts.core.conceptbase)
ConceptBase() (ConceptBase method)
ConjugateGradientDenseSolver (class in mpacts.contact.matrix.cmtypes)
ConjugateGradientDenseSolver() (ConjugateGradientDenseSolver method)
ConjugateGradientSolver (class in mpacts.contact.matrix.cmtypes)
ConjugateGradientSolver() (ConjugateGradientSolver method)
ConjugateGradientSolver_old (class in mpacts.contact.matrix.cmtypes)
ConjugateGradientSolver_old() (ConjugateGradientSolver_old method)
Connectivity (class in mpacts.geometrygenerators.polyhedron)
Connectivity() (Connectivity method)
construct() (in module mpacts.io.save_load)
construct_PythonCommand() (in module mpacts.io.save_load)
ContactDataBase (class in mpacts.core.contactdata)
ContactDataBase() (ContactDataBase method)
contactdatastorage_configuration() (in module mpacts.core.configuration)
ContactDataStorageConfiguration (class in mpacts.core.configuration)
ContactDataStorageConfiguration() (ContactDataStorageConfiguration method)
ContactDataStorageFactoryBase (class in mpacts.contact.storage.contactdatastorage_factorybase)
ContactDataStorageFactoryBase() (ContactDataStorageFactoryBase method)
ContactDataStorageFactoryDebug (class in mpacts.contact.storage.factory_dummy)
ContactDataStorageFactoryDebug() (ContactDataStorageFactoryDebug method)
ContactDataStorageFactoryDummy (class in mpacts.contact.storage.factory_dummy)
ContactDataStorageFactoryDummy() (ContactDataStorageFactoryDummy method)
ContactDataStorageFactoryMappedMatrix (class in mpacts.contact.storage.factory_mappedmatrix)
ContactDataStorageFactoryMappedMatrix() (ContactDataStorageFactoryMappedMatrix method)
ContactDataStorageFactoryVector (class in mpacts.contact.storage.factory_vector)
ContactDataStorageFactoryVector() (ContactDataStorageFactoryVector method)
ContactDataStorageFactoryVerletVector (class in mpacts.contact.storage.factory_verletvector)
ContactDataStorageFactoryVerletVector() (ContactDataStorageFactoryVerletVector method)
ContactDetectorBase (class in mpacts.contact.detectors.contactdetectorbase)
ContactDetectorBase() (ContactDetectorBase method)
contactforce_DMT() (in module mpacts.core.contactforceformulas)
contactforce_Hertz() (in module mpacts.core.contactforceformulas)
contactforce_JKR() (in module mpacts.core.contactforceformulas)
contactforce_MD() (in module mpacts.core.contactforceformulas)
ContactMatrix_to_np_matrix() (in module mpacts.contact.matrix.pythontools)
ContactMatrix_to_np_matrix_np() (in module mpacts.contact.matrix.pythontools)
ContactMatrix_to_np_matrix_sparse() (in module mpacts.contact.matrix.pythontools)
ContactMatrixFrictionForceCommand (class in mpacts.commands.misc.frictionmatrices)
ContactMatrixFrictionForceCommand() (ContactMatrixFrictionForceCommand method)
ContactMatrixOperatorsBase (class in mpacts.contact.matrix.cmoperators)
ContactMatrixOperatorsBase() (ContactMatrixOperatorsBase method)
ContactMatrixOperatorsR3 (class in mpacts.contact.matrix.cmoperators)
ContactMatrixOperatorsR3() (ContactMatrixOperatorsR3 method)
ContactMatrixStateDummyContactModel (class in mpacts.contact.models.misc.contactmatrixstate_dummycontactmodel)
ContactMatrixStateDummyContactModel() (ContactMatrixStateDummyContactModel method)
ContactMatrixVectorMultiplicationCommand (class in mpacts.contact.matrix.cmtypes)
ContactMatrixVectorMultiplicationCommand() (ContactMatrixVectorMultiplicationCommand method)
ContactModelBase (class in mpacts.contact.models.contactmodelbase)
ContactModelBase() (ContactModelBase method)
ContactModelLinker (class in mpacts.contact.models.contactmodelbase)
ContactModelLinker() (ContactModelLinker method)
ContactModelLinker_3 (class in mpacts.contact.models.contactmodelbase)
ContactModelLinker_3() (ContactModelLinker_3 method)
contactradius_a_MD() (in module mpacts.core.contactforceformulas)
contactradius_c_MD() (in module mpacts.core.contactforceformulas)
contactradius_DMT() (in module mpacts.core.contactforceformulas)
contactradius_Hertz() (in module mpacts.core.contactforceformulas)
contactradius_JKR() (in module mpacts.core.contactforceformulas)
container_name_from_filename() (in module DEMutilities.variables_from_files)
contains_pc() (mpacts.contact.matrix.frictionmatrix.FrictionMatrix method)
Context (class in mpacts.core.units.context)
Context() (Context method)
ControlPoints (class in mpacts.sparkicles.layoutcreator)
ControlPoints() (ControlPoints method)
convert_fd_jpk_h5() (in module DEMutilities.afmtools.import_afm_data)
convert_id_to_baseobject_if_necessary() (in module mpacts.io.save_load)
convert_to_commandlists() (DEMutilities.commandlist_converter.CommandListConverter method)
convert_to_timedcommandlists() (DEMutilities.commandlist_converter.CommandListConverter method)
Converter (class in mpacts.core.units.converters)
converter (mpacts.core.units.definitions.Definition attribute)
Converter() (Converter method)
copy() (DEMutilities.postprocessing.h5storage.H5Entry method)
(mpacts.core.command.CommandGateBase method)
copy_all_data_recursive() (DEMutilities.postprocessing.h5storage.H5DataSection method)
copy_data() (DEMutilities.postprocessing.h5storage.H5DataSection method)
copy_to_array() (mpacts.core.arrays.Array method)
CopyArrayCommand (class in mpacts.commands.onarrays.transfer)
CopyArrayCommand() (CopyArrayCommand method)
CopyArrayToGhostCommand (class in mpacts.commands.onarrays.transfer)
CopyArrayToGhostCommand() (CopyArrayToGhostCommand method)
CopyCppIndexCommand (class in mpacts.commands.onarrays.setvalue)
CopyCppIndexCommand() (CopyCppIndexCommand method)
CopyDataToGhostCommand (class in mpacts.commands.onarrays.transfer)
CopyDataToGhostCommand() (CopyDataToGhostCommand method)
correct_triangle_normals() (in module mpacts.geometrygenerators.trianglegeometries)
correct_triangle_order() (in module mpacts.geometrygenerators.polyhedron)
count_arraymanagersizes() (in module mpacts.tools.simulation_metrics)
count_arraysizes() (in module mpacts.tools.simulation_metrics)
count_contactprimitives() (in module mpacts.tools.simulation_metrics)
count_contacts() (in module mpacts.tools.simulation_metrics)
count_dofs() (in module mpacts.tools.simulation_metrics)
CountClusterSizes() (in module DEMutilities.postprocessing.analysistools.spatial.clusters)
CountContactSpheres (class in DEMutilities.postprocessing.analysistools.spatial.countcontacts)
CountContactSpheres() (CountContactSpheres method)
CountContactsWithMesh (class in DEMutilities.postprocessing.analysistools.spatial.countcontacts)
CountContactsWithMesh() (CountContactsWithMesh method)
Counter (class in DEMutilities.postprocessing.operators.operators)
Counter() (Counter method)
(DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
CountNumberOfSubParticlesCommand (class in mpacts.commands.onparticles.countperparent)
CountNumberOfSubParticlesCommand() (CountNumberOfSubParticlesCommand method)
CountPerParentCommand (class in mpacts.commands.onparticles.countperparent)
CountPerParentCommand() (CountPerParentCommand method)
CpuTimePrinter (class in mpacts.commands.monitors.progress)
CpuTimePrinter() (CpuTimePrinter method)
create() (mpacts.contact.storage.contactdatastorage_factorybase.ContactDataStorageFactoryBase method)
create_array() (in module mpacts.core.arrays)
(mpacts.core.arrays.ArrayManager method)
create_box() (in module mpacts.geometrygenerators.quadgeometries)
create_contact() (mpacts.core.contactdata.ContactDataBase method)
create_contact_writer() (in module DEMutilities.ContactWriters)
create_container_and_add_locals() (DEMutilities.variable_helper.VariableHelper method)
create_docstring() (mpacts.particles.particlebase.ParticleBase class method)
create_evenly_spaced_in_box() (in module mpacts.geometrygenerators.pointgenerators)
create_hex_mesh_from_vertices() (in module mpacts.geometrygenerators.trianglegeometries)
create_hex_mesh_from_vertices_convex_around_center() (in module mpacts.geometrygenerators.trianglegeometries)
create_LUT_1D_Scalar_Array() (in module mpacts.core.lut)
create_LUT_1D_Vector_Array() (in module mpacts.core.lut)
create_LUT_2D_Scalar_Array() (in module mpacts.core.lut)
create_LUT_2D_Vector_Array() (in module mpacts.core.lut)
create_LUT_3D_Scalar_Array() (in module mpacts.core.lut)
create_LUT_3D_Vector_Array() (in module mpacts.core.lut)
create_LUT_4D_Scalar_Array() (in module mpacts.core.lut)
create_LUT_4D_Vector_Array() (in module mpacts.core.lut)
create_one_global_parameter() (in module DEMutilities.variables_from_files)
create_particle() (in module mpacts.core.particle)
(mpacts.core.particle.ParticleCollection method)
create_plane() (in module mpacts.geometrygenerators.quadgeometries)
(in module mpacts.geometrygenerators.trianglegeometries)
create_regular_mesh_from_vertices() (in module mpacts.geometrygenerators.trianglegeometries)
create_same_array_in() (mpacts.core.arrays.Array method)
create_sample_groups() (in module DEMutilities.multisim_layout)
create_subdivided_plane() (in module mpacts.geometrygenerators.quadgeometries)
create_triangulated_box() (in module mpacts.geometrygenerators.trianglegeometries)
create_triangulated_hex_plane() (in module mpacts.geometrygenerators.trianglegeometries)
create_triangulated_hex_rectangle() (in module mpacts.geometrygenerators.trianglegeometries)
create_triangulated_plane() (in module mpacts.geometrygenerators.trianglegeometries)
create_truncatedcone() (in module mpacts.geometrygenerators.trianglegeometries)
create_Vfunnel() (in module mpacts.geometrygenerators.quadgeometries)
CreateCopyParticlesCommand (class in mpacts.commands.onparticles.create_remove)
CreateCopyParticlesCommand() (CreateCopyParticlesCommand method)
createLock() (mpacts.core.units.compat.nullhandler.NullHandler method)
CreateNewReferencedParticleCommand (class in mpacts.commands.onparticles.create_remove)
CreateNewReferencedParticleCommand() (CreateNewReferencedParticleCommand method)
CreationReaction (class in mpacts.commands.misc.molecularreactions)
CreationReaction() (CreationReaction method)
crop_to_beam() (in module mpacts.geometrygenerators.transformations)
(mpacts.geometrygenerators.polyhedron.Polyhedron method)
crop_to_beam_indices() (in module mpacts.geometrygenerators.transformations)
crop_to_sphere() (in module mpacts.geometrygenerators.transformations)
crop_to_sphere_indices() (in module mpacts.geometrygenerators.transformations)
CropIndicesCommand (class in mpacts.commands.onarrays.transfer)
CropIndicesCommand() (CropIndicesCommand method)
cross (class in mpacts.core.expression_cpp)
cross() (cross method)
(in module DEMutilities.numeric_functions)
(in module mpacts.core.expression)
(mpacts.core.new_units.QuantityVector method)
CrossBottomBoundary (class in mpacts.predicates.lighttransport_predicates)
CrossBottomBoundary() (CrossBottomBoundary method)
CrossingBordersCounterCommand (class in DEMutilities.postprocessing.analysistools.clip)
CrossingBordersCounterCommand() (CrossingBordersCounterCommand method)
CrossInternalLayer (class in mpacts.predicates.lighttransport_predicates)
CrossInternalLayer() (CrossInternalLayer method)
CrossTopBoundary (class in mpacts.predicates.lighttransport_predicates)
CrossTopBoundary() (CrossTopBoundary method)
CSV_State (class in mpacts.io.csv_read)
CSV_State() (CSV_State method)
CSVWriter (class in mpacts.io.csv_writer)
CSVWriter() (CSVWriter method)
CubicSpline2D (class in mpacts.core.smoothingkernels)
CubicSpline2D() (CubicSpline2D method)
CubicSpline3D (class in mpacts.core.smoothingkernels)
CubicSpline3D() (CubicSpline3D method)
cull_axis() (DEMutilities.postprocessing.dataview.DataView method)
CurrentIndex (class in mpacts.core.expression_cpp)
CurrentIndex() (CurrentIndex method)
cylinder_to_nodes() (mpacts.geometrygenerators.polyhedron.Connectivity method)
cylinder_unwrap() (DEMutilities.postprocessing.representation.cnh_specific_representation.CNH_Specific_RepresentationSet method)
CylinderDiffusionMatrixCommand (class in mpacts.commands.misc.frictionmatrices)
CylinderDiffusionMatrixCommand() (CylinderDiffusionMatrixCommand method)
CylinderPacking (class in mpacts.geometrygenerators.cylinderpacking)
CylinderPacking() (CylinderPacking method)

D

data_section() (DEMutilities.postprocessing.h5storage.H5DataSection method)
(DEMutilities.postprocessing.h5storage.H5Storage method)
DataFrameReader (class in mpacts.io.datareader)
(class in mpacts.io.datasave_new)
DataFrameReader() (DataFrameReader method), [1]
DataReader (class in mpacts.io.datareader)
(class in mpacts.io.datasave_new)
DataReader() (DataReader method), [1]
DataSaveCommand (class in mpacts.io.datasave)
(class in mpacts.io.datasave_new)
DataSaveCommand() (DataSaveCommand method), [1]
DataView (class in DEMutilities.postprocessing.dataview)
DataView() (DataView method)
debug_used (mpacts.core.units.quantity._Quantity attribute)
(mpacts.core.units.unit._Unit attribute)
DebugContactDataStorage (class in mpacts.contact.storage.factory_dummy)
DebugContactDataStorage() (DebugContactDataStorage method)
DecayCommand (class in mpacts.commands.onparticles.create_remove)
DecayCommand() (DecayCommand method)
deep_execute() (DEMutilities.postprocessing.operators.operators.Accumulator method)
(DEMutilities.postprocessing.operators.operators.Action method)
(DEMutilities.postprocessing.operators.operators.Comparison method)
(DEMutilities.postprocessing.operators.operators.DummyOperator method)
(DEMutilities.postprocessing.operators.operators.Filter method)
(DEMutilities.postprocessing.operators.operators.ForEach method)
(DEMutilities.postprocessing.operators.operators.Function method)
(DEMutilities.postprocessing.operators.operators.OperatorBase method)
(DEMutilities.postprocessing.operators.operators.Printer method)
(DEMutilities.postprocessing.operators.operators.Recorder method)
(DEMutilities.postprocessing.operators.operators.StandardDeviationEstimator method)
default_format (mpacts.core.units.quantity._Quantity attribute)
(mpacts.core.units.unit._Unit attribute)
default_location() (mpacts.core.baseobject.BaseObject method)
default_name() (mpacts.tools.pyProperties.pyProperties method)
DefaultConjugateGradientSolver() (in module mpacts.contact.matrix.conjugategradient)
DefaultProgressPrinter (class in mpacts.commands.monitors.progress)
DefaultProgressPrinter() (DefaultProgressPrinter method)
defaults (mpacts.core.units.context.Context attribute)
Definition (class in mpacts.core.units.definitions)
Definition() (Definition method)
DefinitionSyntaxError (class in mpacts.core.units.errors)
DefinitionSyntaxError() (DefinitionSyntaxError method)
DeformableBodies (class in mpacts.sparkicles.layoutcreator)
DeformableBodies() (DeformableBodies method)
DeformableCapsules (class in mpacts.sparkicles.layoutcreator)
DeformableCapsules() (DeformableCapsules method)
Delaunay3DContactDetector (class in mpacts.contact.detectors.delaunay)
Delaunay3DContactDetector() (Delaunay3DContactDetector method)
delaunay_edges() (in module mpacts.geometrygenerators.linegeometries)
delcolumn() (in module DEMutilities.analyze_parameter_study)
delete_particle() (mpacts.particles.particlecontainer.ParticleContainer method)
delete_subparticles() (mpacts.particles.particlecontainer.ParticleContainer method)
deleteContact() (mpacts.contact.detectors.bending.BendingContactDetector method)
(mpacts.contact.detectors.fixedlist.FixedListContactDetector method)
(mpacts.contact.detectors.fixedlist.PrunedFixedListContactDetector method)
DeleteOldNodesAndTrianglesCmd (class in mpacts.commands.misc.cellabscission)
DeleteOldNodesAndTrianglesCmd() (DeleteOldNodesAndTrianglesCmd method)
DensitySummation (class in mpacts.commands.continuum.sph_density)
DensitySummation() (DensitySummation method)
DepolymerizationCommand (class in mpacts.commands.onparticles.create_remove)
DepolymerizationCommand() (DepolymerizationCommand method)
DeprecatedClass() (in module mpacts.deprecated)
DeprecatedFunction() (in module mpacts.deprecated)
DeprecatedModule() (in module mpacts.deprecated)
DeprecatedThing() (in module mpacts.deprecated)
derived_units (mpacts.core.units.systems._System attribute)
DesignBase (class in DEMutilities.doe_samples)
DesignBase() (DesignBase method)
detect_encoding() (in module mpacts.core.units.compat.tokenize)
DiagonalPreconditionerCommand (class in mpacts.contact.matrix.cmtypes)
DiagonalPreconditionerCommand() (DiagonalPreconditionerCommand method)
diff() (in module mpacts.tools.arrayoperators)
DiffuseCommand (class in mpacts.commands.force.random)
DiffuseCommand() (DiffuseCommand method)
dimensionality (mpacts.core.units.quantity._Quantity attribute)
(mpacts.core.units.unit._Unit attribute)
DimensionalityError (class in mpacts.core.units.errors)
DimensionalityError() (DimensionalityError method)
DimensionDefinition (class in mpacts.core.units.definitions)
DimensionDefinition() (DimensionDefinition method)
dimensionless (mpacts.core.units.quantity._Quantity attribute)
(mpacts.core.units.unit._Unit attribute)
DirectedForceCommand (class in mpacts.commands.force.body)
DirectedForceCommand() (DirectedForceCommand method)
DirectSamplingDesign (class in DEMutilities.doe_samples)
DirectSamplingDesign() (DirectSamplingDesign method)
disable_fp_exceptions() (in module mpacts.core.configuration)
displace_to() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
displace_with_array() (in module mpacts.tools.arrayoperators)
DisplaceXToSphereSurfaceCommand (class in mpacts.commands.misc.lighttransport)
DisplaceXToSphereSurfaceCommand() (DisplaceXToSphereSurfaceCommand method)
DisplaceXtToBoundaryCommand (class in mpacts.commands.misc.lighttransport)
DisplaceXtToBoundaryCommand() (DisplaceXtToBoundaryCommand method)
distance_ray_sphere() (in module mpacts.core.geometrysupport)
DistributeArrayFromParentToChild (class in mpacts.commands.onarrays.transfer)
DistributeArrayFromParentToChild() (DistributeArrayFromParentToChild method)
DistributeSegmentForceMomentToNodeForceCommand (class in mpacts.commands.onarrays.transfer)
DistributeSegmentForceMomentToNodeForceCommand() (DistributeSegmentForceMomentToNodeForceCommand method)
DividePointByCountCommand (class in mpacts.commands.onarrays.linearcombination)
DividePointByCountCommand() (DividePointByCountCommand method)
DivideScalarByCountCommand (class in mpacts.commands.onarrays.linearcombination)
DivideScalarByCountCommand() (DivideScalarByCountCommand method)
DivideTensorByCountCommand (class in mpacts.commands.onarrays.linearcombination)
DivideTensorByCountCommand() (DivideTensorByCountCommand method)
DivideVectorByCountCommand (class in mpacts.commands.onarrays.linearcombination)
DivideVectorByCountCommand() (DivideVectorByCountCommand method)
Division (class in mpacts.core.expression_cpp)
Division() (Division method)
DoAbscissionCmd (class in mpacts.commands.misc.cellabscission)
DoAbscissionCmd() (DoAbscissionCmd method)
documentation() (mpacts.core.propertybase.PropertyBase method)
done() (mpacts.particles.particlebase.ParticleBase method)
dot (class in mpacts.core.expression_cpp)
dot() (dot method)
(in module DEMutilities.numeric_functions)
(in module mpacts.core.expression)
(mpacts.contact.matrix.cmoperators.ContactMatrixOperatorsBase method)
(mpacts.core.new_units.QuantityMatrix method)
(mpacts.core.new_units.QuantitySymmetricMatrix method)
(mpacts.core.new_units.QuantityVector method)
DragForceCommand (class in mpacts.commands.force.body)
DragForceCommand() (DragForceCommand method)
draw_line() (in module DEMutilities.postprocessing.representation.academic_representation)
DummyOperator (class in DEMutilities.postprocessing.operators.operators)
DummyOperator() (DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
(DummyOperator method)
dumps() (mpacts.io.serial_encoder_decoder.SerialEncoderDecoder method)
(mpacts.io.serial_encoder_decoder_new.SerialEncoderDecoder method)
dValue() (mpacts.core.smoothingkernels.CohesionSplineAkinci3D method)
(mpacts.core.smoothingkernels.CubicSpline2D method)
(mpacts.core.smoothingkernels.CubicSpline3D method)
(mpacts.core.smoothingkernels.IBM2D method)
(mpacts.core.smoothingkernels.IBM3D method)
(mpacts.core.smoothingkernels.QuinticSpline2D method)
(mpacts.core.smoothingkernels.QuinticSpline3D method)
(mpacts.core.smoothingkernels.Wendland2D method)
(mpacts.core.smoothingkernels.Wendland3D method)
dyadic() (mpacts.core.new_units.QuantityVector method)
dyadic_self() (mpacts.core.new_units.QuantityVector method)
DynamicMeshUniformizationCommand (class in mpacts.commands.geometry.modifymesh)
DynamicMeshUniformizationCommand() (DynamicMeshUniformizationCommand method)

E

eccentricity() (in module mpacts.contact.models.deprecated.ellipsoid_contact_force)
edge_length() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
edges() (mpacts.geometrygenerators.meshobjects.MeshObject method)
edgeStatistics() (in module mpacts.geometrygenerators.polyhedron)
Ellipse (class in mpacts.core.geometrysupport)
Ellipse() (Ellipse method)
ellipse_intersection_inplane() (in module mpacts.core.geometrysupport)
ellipse_intersection_line() (in module mpacts.core.geometrysupport)
emit() (mpacts.core.units.compat.nullhandler.NullHandler method)
emptybar() (in module DEMutilities.relaxcontacts)
enable_fp_exceptions() (in module mpacts.core.configuration)
EnclosedAreaConservationForceCommand (class in mpacts.commands.geometry.cylinder)
EnclosedAreaConservationForceCommand() (EnclosedAreaConservationForceCommand method)
EnclosedAreaConservationForceNormCommand (class in mpacts.commands.geometry.cylinder)
EnclosedAreaConservationForceNormCommand() (EnclosedAreaConservationForceNormCommand method)
EnvironmentalDragForceCommand (class in mpacts.commands.force.body)
EnvironmentalDragForceCommand() (EnvironmentalDragForceCommand method)
EnvironmentalDragTorqueCommand (class in mpacts.commands.force.body)
EnvironmentalDragTorqueCommand() (EnvironmentalDragTorqueCommand method)
EOS_Monaghan (class in mpacts.commands.continuum.sph_eos)
EOS_Monaghan() (EOS_Monaghan method)
EOS_Monaghan_Anisotropic (class in mpacts.commands.continuum.sph_eos)
EOS_Monaghan_Anisotropic() (EOS_Monaghan_Anisotropic method)
EOS_Monaghan_Fluid (class in mpacts.commands.continuum.sph_eos)
EOS_Monaghan_Fluid() (EOS_Monaghan_Fluid method)
EOS_Monaghan_Fluid_Anisotropic (class in mpacts.commands.continuum.sph_eos)
EOS_Monaghan_Fluid_Anisotropic() (EOS_Monaghan_Fluid_Anisotropic method)
error (mpacts.core.units.measurement._Measurement attribute)
errorbar() (DEMutilities.postprocessing.representation.academic_representation.AcademicRepresentationSet method)
errorbar_series() (DEMutilities.postprocessing.representation.academic_representation.AcademicRepresentationSet method)
EvalTreeNode (class in mpacts.core.units.units_eval)
EvalTreeNode() (EvalTreeNode method)
evaluate() (mpacts.core.units.units_eval.EvalTreeNode method)
exact_type (mpacts.core.units.compat.tokenize.TokenInfo attribute)
exchange() (mpacts.core.baseobject.BaseObject method)
execute() (DEMutilities.determine_hertz_dissipative_coefficient.A_Determinator method)
(DEMutilities.postprocessing.analysistools.clip.CrossingBordersCounterCommand method)
(DEMutilities.postprocessing.analysistools.clip.ProcessRayCommand method)
(DEMutilities.postprocessing.analysistools.spatial.bintogrid.ComputeDensityCommand method)
(DEMutilities.postprocessing.analysistools.spatial.rdf.RadialDistributionFunction method)
(DEMutilities.postprocessing.operators.operators.Accumulator method)
(DEMutilities.postprocessing.operators.operators.Action method)
(DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
(DEMutilities.postprocessing.operators.operators.Comparison method)
(DEMutilities.postprocessing.operators.operators.Counter method)
(DEMutilities.postprocessing.operators.operators.DummyOperator method)
(DEMutilities.postprocessing.operators.operators.Filter method)
(DEMutilities.postprocessing.operators.operators.ForEach method)
(DEMutilities.postprocessing.operators.operators.FrameIndexPrinter method)
(DEMutilities.postprocessing.operators.operators.Function method)
(DEMutilities.postprocessing.operators.operators.GetData method)
(DEMutilities.postprocessing.operators.operators.HasData method)
(DEMutilities.postprocessing.operators.operators.OperatorBase method)
(DEMutilities.postprocessing.operators.operators.Printer method)
(DEMutilities.postprocessing.operators.operators.Recorder method)
(DEMutilities.postprocessing.operators.operators.StandardDeviationEstimator method)
(mpacts.commands.geometry.curvature.ComputeCurvatureOnceCommand method)
(mpacts.commands.misc.cellabscission.AbscissionCheck method)
(mpacts.commands.misc.cellabscission.AddConnectivitiesCmd method)
(mpacts.commands.misc.cellabscission.AddNewNodesCmd method)
(mpacts.commands.misc.cellabscission.DeleteOldNodesAndTrianglesCmd method)
(mpacts.commands.misc.cellabscission.DoAbscissionCmd method)
(mpacts.commands.misc.cellabscission.PrintArrayCmd method)
(mpacts.commands.misc.optimizebandwidth.OptimizeBandwidth method)
(mpacts.commands.misc.splitcapsule.SplitCapsuleCommand method)
(mpacts.commands.monitors.progress.ProgressIndicatorCommand method)
(mpacts.commands.onparticles.generateindisk.GenerateRandomParticleInDisk method)
(mpacts.commands.onparticles.generateindisk.GenerateRandomParticleInSphere method)
(mpacts.contact.detectors.supercontactdetector.SuperContactDetectorAABB method)
(mpacts.core.command.Command method)
(mpacts.core.command.CommandList method)
(mpacts.core.command.ParallelCommandList method)
(mpacts.core.command.TimedCommandList method)
(mpacts.core.command.VerboseCommandList method)
(mpacts.io.datasave.DataSaveCommand method)
(mpacts.io.datasave_new.DataSaveCommand method)
(mpacts.io.generate_timeseries.GenerateTimeSeriesCommand method)
(mpacts.io.save_load.SaveCommand method)
(mpacts.io.simple_writer.simpleWriter method)
ExecuteAlways (class in mpacts.core.command)
ExecuteAlways() (ExecuteAlways method)
ExecuteAtGivenTimes (class in mpacts.core.command)
ExecuteAtGivenTimes() (ExecuteAtGivenTimes method)
ExecuteEveryNTimes (class in mpacts.core.command)
ExecuteEveryNTimes() (ExecuteEveryNTimes method)
ExecuteEveryPCSizeChange (class in mpacts.core.command)
ExecuteEveryPCSizeChange() (ExecuteEveryPCSizeChange method)
ExecuteEveryWallTimeInterval (class in mpacts.core.command)
ExecuteEveryWallTimeInterval() (ExecuteEveryWallTimeInterval method)
ExecuteExceptFirstStep (class in mpacts.core.command)
ExecuteExceptFirstStep() (ExecuteExceptFirstStep method)
ExecuteFromTime (class in mpacts.core.command)
ExecuteFromTime() (ExecuteFromTime method)
ExecuteNever (class in mpacts.core.command)
ExecuteNever() (ExecuteNever method)
ExecuteOnce (class in mpacts.core.command)
ExecuteOnce() (ExecuteOnce method)
ExecuteOncePerStep (class in mpacts.core.command)
ExecuteOncePerStep() (ExecuteOncePerStep method)
ExecuteTimeInterval (class in mpacts.core.command)
ExecuteTimeInterval() (ExecuteTimeInterval method)
ExecuteUntilTime (class in mpacts.core.command)
ExecuteUntilTime() (ExecuteUntilTime method)
exp() (in module mpacts.core.expression)
exponential (class in mpacts.core.expression_cpp)
exponential() (exponential method)
ExponentialMovingAverageCommand (class in mpacts.commands.onarrays.average)
ExponentialMovingAverageCommand() (ExponentialMovingAverageCommand method)
Expr() (in module mpacts.core.expression)
Expression (class in mpacts.core.expression_cpp)
Expression() (Expression method)
ExpressionCommand (class in mpacts.core.expression_cpp)
ExpressionCommand() (ExpressionCommand method)
extract_column() (in module DEMutilities.numeric_functions)
extract_dict_from_path() (DEMutilities.variables_from_files.VariableExtractor method)
extract_param_dict() (in module DEMutilities.variables_from_files)
extract_row() (in module DEMutilities.numeric_functions)

F

F1() (in module mpacts.contact.models.deprecated.ellipsoid_contact_force)
F2() (in module mpacts.contact.models.deprecated.ellipsoid_contact_force)
fft_on_path() (in module DEMutilities.postprocessing.analysistools.temporal.fourier)
FilamentParticleContainer (class in mpacts.particles.specialcases.filament)
FilamentParticleContainer() (FilamentParticleContainer method)
file_name() (mpacts.io.csv_writer.CSVWriter method)
(mpacts.io.vtk_writer.VTKSerialWriter method)
fill() (mpacts.core.units.quantity._Quantity method)
filt() (in module DEMutilities.postprocessing.h5storage)
Filter (class in DEMutilities.postprocessing.operators.operators)
Filter() (DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
(Filter method)
filter_baseobjects_and_set_state() (in module mpacts.io.save_load)
filter_on_axis() (DEMutilities.postprocessing.h5storage.H5Entry method)
find() (mpacts.core.baseobject.BaseObject method)
(mpacts.core.new_units.UnitRegister method)
find_closest_partners() (in module mpacts.geometrygenerators.pointgenerators)
find_closest_partners_old() (in module mpacts.geometrygenerators.pointgenerators)
find_closest_partners_spatial() (in module mpacts.geometrygenerators.pointgenerators)
find_closest_trio() (in module mpacts.geometrygenerators.pointgenerators)
find_connected_nodes() (in module mpacts.core.units.util)
find_edge() (in module mpacts.geometrygenerators.subdivide)
find_edge_triangles() (in module mpacts.geometrygenerators.trianglegeometries)
find_first_name_in_parent() (in module mpacts.particles.particlecontainercommands)
find_from_distance() (in module mpacts.geometrygenerators.pointgenerators)
find_in_subtree() (mpacts.core.baseobject.BaseObject method)
find_parameter_dict() (DEMutilities.variables_from_files.VariableExtractor method)
find_random_partners() (in module mpacts.geometrygenerators.pointgenerators)
find_shortest_path() (in module mpacts.core.units.util)
find_triangle_edges() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
FindNaNCommand (class in mpacts.commands.monitors.debug)
FindNaNCommand() (FindNaNCommand method)
findVertex() (mpacts.geometrygenerators.boolean3Dshapegenerator.Boolean3DShapeGenerator method)
(mpacts.geometrygenerators.hexagonalclosepacking.HexagonalClosePacking method)
(mpacts.geometrygenerators.polyhedron.Polyhedron method)
first() (mpacts.core.command.CommandList method)
(mpacts.core.command.ParallelCommandList method)
(mpacts.core.command.TimedCommandList method)
(mpacts.core.command.VerboseCommandList method)
fix_str_conversions() (in module mpacts.core.units.util)
Fixed1DSpringsCommand (class in mpacts.commands.force.body)
Fixed1DSpringsCommand() (Fixed1DSpringsCommand method)
fixed_boundary_condition() (mpacts.commands.continuum.compartmentmodeldiffusion.GridRD_2D method)
FixedListContactDetector (class in mpacts.contact.detectors.fixedlist)
FixedListContactDetector() (FixedListContactDetector method)
FixedNormalSpringsCommand (class in mpacts.commands.force.body)
FixedNormalSpringsCommand() (FixedNormalSpringsCommand method)
FixedNumberOfStepsCondition (class in mpacts.commands.monitors.progress)
FixedNumberOfStepsCondition() (FixedNumberOfStepsCondition method)
FixedPointConstraint() (in module mpacts.boundaryconditions.rigid_body_constraints)
FixedSpringsCommand (class in mpacts.commands.force.body)
FixedSpringsCommand() (FixedSpringsCommand method)
FixedStiffnessMatrixSpringsCommand (class in mpacts.commands.force.body)
FixedStiffnessMatrixSpringsCommand() (FixedStiffnessMatrixSpringsCommand method)
flat (mpacts.core.units.quantity._Quantity attribute)
flip_normals() (mpacts.geometrygenerators.meshobjects.MeshObject method)
(mpacts.geometrygenerators.polyhedron.Polyhedron method)
for_each_child() (mpacts.core.baseobject.BaseObject method)
for_each_child_recursive() (mpacts.core.baseobject.BaseObject method)
ForceControlledDisplacement() (in module mpacts.commands.force.constraints.force_controlled_displacement)
ForEach (class in DEMutilities.postprocessing.operators.operators)
ForEach() (DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
(ForEach method)
foreach_array() (mpacts.particles.particlecontainer.ParticleContainer method)
format_babel() (mpacts.core.units.quantity._Quantity method)
(mpacts.core.units.systems._System method)
(mpacts.core.units.unit._Unit method)
format_number() (in module DEMutilities.postprocessing.representation.academic_representation)
format_unit() (in module mpacts.core.units.formatting)
formatter() (in module mpacts.core.units.formatting)
ForwardEuler_Generic (class in mpacts.commands.time_evolution.integration)
ForwardEuler_Generic() (ForwardEuler_Generic method)
ForwardEuler_LiquidDragDominated (class in mpacts.commands.time_evolution.integration)
ForwardEuler_LiquidDragDominated() (ForwardEuler_LiquidDragDominated method)
ForwardEuler_Translation (class in mpacts.commands.time_evolution.integration)
ForwardEuler_Translation() (ForwardEuler_Translation method)
ForwardEuler_UncoupledOverdamped (class in mpacts.commands.time_evolution.integration)
ForwardEuler_UncoupledOverdamped() (ForwardEuler_UncoupledOverdamped method)
ForwardEuler_UncoupledOverdampedMatrix (class in mpacts.commands.time_evolution.integration)
ForwardEuler_UncoupledOverdampedMatrix() (ForwardEuler_UncoupledOverdampedMatrix method)
FrameIndexPrinter (class in DEMutilities.postprocessing.operators.operators)
FrameIndexPrinter() (DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
(FrameIndexPrinter method)
FrictionMatrix (class in mpacts.contact.matrix.frictionmatrix)
FrictionMatrix() (FrictionMatrix method)
FrictionOnAreaCommand (class in mpacts.commands.misc.frictionmatrices)
FrictionOnAreaCommand() (FrictionOnAreaCommand method)
from_context() (mpacts.core.units.context.Context class method)
from_lines() (mpacts.core.units.context.Context class method)
(mpacts.core.units.systems._Group class method)
(mpacts.core.units.systems._System class method)
from_reference() (mpacts.core.units.converters.Converter method)
(mpacts.core.units.converters.OffsetConverter method)
(mpacts.core.units.converters.ScaleConverter method)
from_string() (mpacts.core.units.definitions.Definition class method)
from_tuple() (mpacts.core.units.quantity._Quantity class method)
FullFactorialDesign (class in DEMutilities.doe_samples)
FullFactorialDesign() (FullFactorialDesign method)
FullMatrixConjugateGradientSolver (class in mpacts.contact.matrix.cmtypes)
FullMatrixConjugateGradientSolver() (FullMatrixConjugateGradientSolver method)
funcs (mpacts.core.units.context.Context attribute)
Function (class in DEMutilities.postprocessing.operators.operators)
function() (DEMutilities.postprocessing.h5storage.H5Entry method)
Function() (DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
(Function method)
function_on_axis() (DEMutilities.postprocessing.h5storage.H5Entry method)

G

GaussianConeForceCommand (class in mpacts.commands.force.body)
GaussianConeForceCommand() (GaussianConeForceCommand method)
GearsCorrector_Translation (class in mpacts.commands.time_evolution.integration)
GearsCorrector_Translation() (GearsCorrector_Translation method)
GearsPredictor_Translation (class in mpacts.commands.time_evolution.integration)
GearsPredictor_Translation() (GearsPredictor_Translation method)
generate() (DEMutilities.doe_samples.DesignBase method)
(DEMutilities.doe_samples.DirectSamplingDesign method)
(DEMutilities.doe_samples.FullFactorialDesign method)
(DEMutilities.doe_samples.LatinHyperCubeDesign method)
generate_layout() (in module DEMutilities.multisim_layout)
generate_single_sample_layout() (in module DEMutilities.multisim_layout)
GenerateConditionalCopies (class in mpacts.commands.onparticles.create_remove)
GenerateConditionalCopies() (GenerateConditionalCopies method)
GenerateInQuadCommand (class in mpacts.commands.onparticles.create_remove)
GenerateInQuadCommand() (GenerateInQuadCommand method)
GenerateInSphereCommand (class in mpacts.commands.onparticles.create_remove)
GenerateInSphereCommand() (GenerateInSphereCommand method)
GenerateOnSphericalHullCommand (class in mpacts.commands.onparticles.create_remove)
GenerateOnSphericalHullCommand() (GenerateOnSphericalHullCommand method)
GenerateRandomParticleInDisk (class in mpacts.commands.onparticles.generateindisk)
GenerateRandomParticleInDisk() (GenerateRandomParticleInDisk method)
GenerateRandomParticleInSphere (class in mpacts.commands.onparticles.generateindisk)
GenerateRandomParticleInSphere() (GenerateRandomParticleInSphere method)
GenerateSeedPointsAlongThicknessCommand (class in mpacts.commands.geometry.triangle)
GenerateSeedPointsAlongThicknessCommand() (GenerateSeedPointsAlongThicknessCommand method)
GenerateTimeSeriesCommand (class in mpacts.io.generate_timeseries)
GenerateTimeSeriesCommand() (GenerateTimeSeriesCommand method)
geometry_name() (mpacts.core.geometrytags.GeometryTagBase method)
GeometryTag_ComposedParticle (class in mpacts.core.geometrytags)
GeometryTag_ComposedParticle() (GeometryTag_ComposedParticle method)
GeometryTag_DeformableCapsule (class in mpacts.core.geometrytags)
GeometryTag_DeformableCapsule() (GeometryTag_DeformableCapsule method)
GeometryTag_DeformableCylinder (class in mpacts.core.geometrytags)
GeometryTag_DeformableCylinder() (GeometryTag_DeformableCylinder method)
GeometryTag_DeformableLine (class in mpacts.core.geometrytags)
GeometryTag_DeformableLine() (GeometryTag_DeformableLine method)
GeometryTag_DeformableRoundedTriangle (class in mpacts.core.geometrytags)
GeometryTag_DeformableRoundedTriangle() (GeometryTag_DeformableRoundedTriangle method)
GeometryTag_DeformableTriangle (class in mpacts.core.geometrytags)
GeometryTag_DeformableTriangle() (GeometryTag_DeformableTriangle method)
GeometryTag_Disk (class in mpacts.core.geometrytags)
GeometryTag_Disk() (GeometryTag_Disk method)
GeometryTag_Ray (class in mpacts.core.geometrytags)
GeometryTag_Ray() (GeometryTag_Ray method)
GeometryTag_RigidCapsule (class in mpacts.core.geometrytags)
GeometryTag_RigidCapsule() (GeometryTag_RigidCapsule method)
GeometryTag_RigidCone (class in mpacts.core.geometrytags)
GeometryTag_RigidCone() (GeometryTag_RigidCone method)
GeometryTag_RigidCylinder (class in mpacts.core.geometrytags)
GeometryTag_RigidCylinder() (GeometryTag_RigidCylinder method)
GeometryTag_RigidCylinderBottom (class in mpacts.core.geometrytags)
GeometryTag_RigidCylinderBottom() (GeometryTag_RigidCylinderBottom method)
GeometryTag_RigidCylinderTop (class in mpacts.core.geometrytags)
GeometryTag_RigidCylinderTop() (GeometryTag_RigidCylinderTop method)
GeometryTag_RigidQuad (class in mpacts.core.geometrytags)
GeometryTag_RigidQuad() (GeometryTag_RigidQuad method)
GeometryTag_RigidRoundedTriangle (class in mpacts.core.geometrytags)
GeometryTag_RigidRoundedTriangle() (GeometryTag_RigidRoundedTriangle method)
GeometryTag_RigidSPH (class in mpacts.core.geometrytags)
GeometryTag_RigidSPH() (GeometryTag_RigidSPH method)
GeometryTag_RigidSphere (class in mpacts.core.geometrytags)
GeometryTag_RigidSphere() (GeometryTag_RigidSphere method)
GeometryTag_RigidTriangle (class in mpacts.core.geometrytags)
GeometryTag_RigidTriangle() (GeometryTag_RigidTriangle method)
GeometryTag_SPH (class in mpacts.core.geometrytags)
GeometryTag_SPH() (GeometryTag_SPH method)
GeometryTag_Sphere (class in mpacts.core.geometrytags)
GeometryTag_Sphere() (GeometryTag_Sphere method)
GeometryTag_Spheroid (class in mpacts.core.geometrytags)
GeometryTag_Spheroid() (GeometryTag_Spheroid method)
GeometryTagBase (class in mpacts.core.geometrytags)
GeometryTagBase() (GeometryTagBase method)
get() (DEMutilities.postprocessing.h5storage.H5BaseEntry method)
(mpacts.core.baseobject.BaseObject method)
(mpacts.io.csv_read.CSV_State method)
(mpacts.io.np_read.SimpleState method)
(mpacts.io.vtp_read.VTP_State method)
(mpacts.io.vtu_read.VtuState method)
get_all_cells() (mpacts.core.mesh.MeshBase method)
get_array() (mpacts.core.arrays.ArrayManager method)
get_array_names() (in module mpacts.commands.misc.cellabscission)
get_arrayvalue() (mpacts.core.particle.Particle method)
get_attr() (DEMutilities.postprocessing.h5storage.H5BaseEntry method)
get_axis_rotation_matrix() (in module mpacts.geometrygenerators.transformations)
get_cell() (mpacts.core.mesh.MeshBase method)
get_child_predicate() (mpacts.predicates.predicates.PredicateBase method)
get_cmap() (in module DEMutilities.postprocessing.representation.cmap_tools)
get_collection() (mpacts.core.particle.ParticleCollection method)
get_collector() (in module mpacts.boundaryconditions.rigid_body_constraints)
get_constructing_function() (in module mpacts.io.save_load)
get_contact() (mpacts.core.contactdata.ContactDataBase method)
get_contact_data() (mpacts.contact.detectors.contactdetectorbase.ContactDetectorBase method)
get_contact_list() (mpacts.core.contactdata.ContactDataBase method)
get_contactstate_description() (mpacts.core.contactdata.ContactDataBase method)
get_data() (DEMutilities.postprocessing.dataview.DataView method)
(DEMutilities.postprocessing.h5storage.H5Entry method)
get_data_over_time() (in module DEMutilities.data_over_time)
get_debug_info() (DEMutilities.postprocessing.operators.operators.OperatorBase method)
get_element() (mpacts.contact.matrix.cmtypes.CG_Matrix_Iface method)
(mpacts.contact.matrix.cmtypes.CG_Vector_Iface method)
(mpacts.core.arrays.Array method)
get_gate() (in module mpacts.tools.gateparse)
get_global_index() (mpacts.core.particle.Particle method)
get_np_element() (mpacts.contact.matrix.frictionmatrix.FrictionMatrix method)
get_oriented_triangle_edges() (in module mpacts.geometrygenerators.polyhedron)
get_particle() (in module mpacts.core.particle)
(mpacts.core.particle.ParticleCollection method)
(mpacts.particles.particlecontainer.ParticleContainer method)
get_particle_from_global() (in module mpacts.core.particle)
get_particlecollection() (in module mpacts.core.particle)
get_pc() (mpacts.core.particle.Particle method)
get_pc_sizes() (mpacts.io.vtu_read.VtuState method)
get_post_collector() (in module mpacts.boundaryconditions.rigid_body_constraints)
get_pre_collector() (in module mpacts.boundaryconditions.rigid_body_constraints)
get_principal_basis() (in module mpacts.geometrygenerators.transformations)
get_random_cmap() (in module DEMutilities.postprocessing.representation.cmap_tools)
get_random_seed() (in module mpacts.tools.random_seed)
get_skew() (in module mpacts.geometrygenerators.transformations)
get_string() (mpacts.core.new_units.Unit method)
get_string_SI() (mpacts.core.new_units.Unit method)
get_time() (mpacts.core.simulation.Simulation method)
(mpacts.io.readerstatebase.ReaderStateBase method)
(mpacts.io.vtp_read.VTP_State method)
get_timestep() (mpacts.core.simulation.Simulation method)
get_type_information() (mpacts.core.baseobject.BaseObject method)
get_unit() (mpacts.core.propertybase.PropertyBase method)
get_value() (DEMutilities.postprocessing.dataview.DataView method)
(mpacts.core.baseobject.BaseObject method)
GetData (class in DEMutilities.postprocessing.operators.operators)
GetData() (DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
(GetData method)
GetItem (class in mpacts.core.expression_cpp)
GetItem() (GetItem method)
getrandbits() (in module DEMutilities.numeric_functions)
getVertices() (mpacts.geometrygenerators.boolean3Dshapegenerator.Boolean3DShapeGenerator method)
(mpacts.geometrygenerators.cylinderpacking.CylinderPacking method)
(mpacts.geometrygenerators.hexagonalclosepacking.HexagonalClosePacking method)
GhostContactDataTranslator (class in mpacts.boundaryconditions.ghostpc)
GhostContactDataTranslator() (GhostContactDataTranslator method)
GhostParticleManager (class in mpacts.boundaryconditions.ghostpc)
GhostParticleManager() (GhostParticleManager method)
git_revision() (in module mpacts.core.configuration)
global_to_local_index() (mpacts.core.indextranslator.IndexTranslator method)
global_to_parent_particle_index() (mpacts.core.indextranslator.IndexTranslator method)
Gravity2Command (class in mpacts.commands.force.body)
Gravity2Command() (Gravity2Command method)
GravityCommand (class in mpacts.commands.force.body)
GravityCommand() (GravityCommand method)
GridBasedContactDetector (class in mpacts.contact.detectors.gridbased)
GridBasedContactDetector() (GridBasedContactDetector method)
GridRD_2D (class in mpacts.commands.continuum.compartmentmodeldiffusion)
GridRD_2D() (GridRD_2D method)
group() (in module mpacts.core.units.compat.tokenize)
grow_append() (DEMutilities.postprocessing.operators.operators.Recorder method)
grow_extend() (DEMutilities.postprocessing.operators.operators.Recorder method)
grow_set() (DEMutilities.postprocessing.operators.operators.Recorder method)
Growth_LinearCommand (class in mpacts.commands.misc.cellcycle)
Growth_LinearCommand() (Growth_LinearCommand method)
Growth_QuCommand (class in mpacts.commands.misc.cellcycle)
Growth_QuCommand() (Growth_QuCommand method)
GrowthBudCommand (class in mpacts.commands.misc.cellcycle)
GrowthBudCommand() (GrowthBudCommand method)
guess_BaseName() (mpacts.io.readerstatebase.ReaderStateBase method)

H

H5BaseEntry (class in DEMutilities.postprocessing.h5storage)
H5BaseEntry() (H5BaseEntry method)
H5DataSection (class in DEMutilities.postprocessing.h5storage)
H5DataSection() (H5DataSection method)
H5Entry (class in DEMutilities.postprocessing.h5storage)
H5Entry() (H5Entry method)
H5Storage (class in DEMutilities.postprocessing.h5storage)
H5Storage() (H5Storage method)
h5todict() (in module DEMutilities.postprocessing.h5storage)
h5topandas() (in module DEMutilities.postprocessing.h5storage)
handle() (mpacts.core.units.compat.nullhandler.NullHandler method)
has_cell() (mpacts.core.mesh.MeshBase method)
has_op_with_name() (DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
has_set_data() (in module DEMutilities.postprocessing.representation.academic_representation)
has_symbol (mpacts.core.units.definitions.Definition attribute)
HasData (class in DEMutilities.postprocessing.operators.operators)
HasData() (DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
(HasData method)
hasFixedRoundingRadius() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
hash_array() (in module mpacts.tools.arrayhash)
hash_tree() (in module mpacts.tools.arrayhash)
hashvalue (mpacts.core.units.compat.lrucache._HashedSeq attribute)
HdfFrameReader (class in DEMutilities.postprocessing.h5storage)
HdfFrameReader() (HdfFrameReader method)
heatmap() (DEMutilities.postprocessing.representation.academic_representation.AcademicRepresentationSet method)
(DEMutilities.postprocessing.representation.default_representation.RepresentationSet method)
heatmap3D() (in module DEMutilities.postprocessing.representation.export_vtk)
heightmap() (DEMutilities.postprocessing.representation.cnh_specific_representation.CNH_Specific_RepresentationSet method)
Hertz_ellipsoid() (in module mpacts.contact.models.deprecated.ellipsoid_contact_force)
Hertz_force() (in module mpacts.contact.models.deprecated.ellipsoid_contact_force)
hexagonal_lattice() (in module mpacts.geometrygenerators.pointgenerators)
hexagonal_lattice_in_rectangle() (in module mpacts.geometrygenerators.pointgenerators)
HexagonalClosePacking (class in mpacts.geometrygenerators.hexagonalclosepacking)
HexagonalClosePacking() (HexagonalClosePacking method)
highpass_filter() (in module DEMutilities.postprocessing.analysistools.temporal.fourier)
HilbertCurveSort() (in module DEMutilities.postprocessing.analysistools.spatial.spartialsort)
HilbertCurveSortCommand (class in mpacts.commands.misc.spatialsorting)
HilbertCurveSortCommand() (HilbertCurveSortCommand method)
Histogram() (DEMutilities.postprocessing.analysistools.spatial.clusters.ClusterAnalysis method)
histogram() (DEMutilities.postprocessing.representation.academic_representation.AcademicRepresentationSet method)

I

i() (mpacts.core.expression_cpp.Expression method)
IBM2D (class in mpacts.core.smoothingkernels)
IBM2D() (IBM2D method)
IBM3D (class in mpacts.core.smoothingkernels)
IBM3D() (IBM3D method)
IcoSphere (class in mpacts.geometrygenerators.meshobjects)
IcoSphere() (IcoSphere method)
IdealizedMicroPipetteCommand (class in mpacts.commands.force.constraints.micropipette)
IdealizedMicroPipetteCommand() (IdealizedMicroPipetteCommand method)
identify() (mpacts.core.baseobject.BaseObject method)
imag (mpacts.core.units.quantity._Quantity attribute)
import_csv() (in module DEMutilities.postprocessing.h5storage)
import_fd_jpk_curve() (in module DEMutilities.afmtools.import_afm_data)
import_fd_path_h5() (in module DEMutilities.afmtools.import_afm_data)
import_h5() (in module DEMutilities.postprocessing.h5storage)
import_jpk_processed_curve() (in module DEMutilities.afmtools.import_afm_data)
import_param_and_make_cm_dict() (in module DEMutilities.variables_from_files)
in_beam() (in module DEMutilities.postprocessing.analysistools.clip)
in_cylinder() (in module DEMutilities.postprocessing.analysistools.clip)
in_infinite_cylinder() (in module DEMutilities.postprocessing.analysistools.clip)
in_sphere() (in module DEMutilities.postprocessing.analysistools.clip)
index_translator() (in module mpacts.particles.particlebase)
IndexProperty (class in mpacts.core.valueproperties)
IndexProperty() (IndexProperty method)
IndexTranslator (class in mpacts.core.indextranslator)
IndexTranslator() (IndexTranslator method)
IndexValue (class in mpacts.core.expression_cpp)
IndexValue() (IndexValue method)
indices_to_mask() (in module DEMutilities.numeric_functions)
inertia_tensor() (mpacts.geometrygenerators.meshobjects.MeshObject method)
inertia_tensor_diagonal() (mpacts.geometrygenerators.meshobjects.MeshObject method)
inertiaTensor() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
inertiaTensorTetra() (in module mpacts.geometrygenerators.inertia)
infer_base_unit() (in module mpacts.core.units.util)
InheritRotationb2iCommand (class in mpacts.commands.onarrays.transfer)
InheritRotationb2iCommand() (InheritRotationb2iCommand method)
InheritRotationi2bCommand (class in mpacts.commands.onarrays.transfer)
InheritRotationi2bCommand() (InheritRotationi2bCommand method)
init() (mpacts.contact.models.pycontactmodelbase.PyContactModelBase method)
init_contacts() (mpacts.particles.specialcases.filament.FilamentParticleContainer method)
(mpacts.particles.specialcases.molecularmotor.MolecularMotorParticleContainer method)
init_species() (in module mpacts.io.reactions_from_sbml)
init_variables() (mpacts.particles.specialcases.filament.FilamentParticleContainer method)
(mpacts.particles.specialcases.molecularmotor.MolecularMotorParticleContainer method)
InitBinaryFission_Directed (class in mpacts.predicates.cellcycle_predicates)
InitBinaryFission_Directed() (InitBinaryFission_Directed method)
InitBinaryFission_Random (class in mpacts.predicates.cellcycle_predicates)
InitBinaryFission_Random() (InitBinaryFission_Random method)
InitBudding_Random (class in mpacts.predicates.cellcycle_predicates)
InitBudding_Random() (InitBudding_Random method)
InitDensitySummation_2D (class in mpacts.commands.continuum.sph_density)
InitDensitySummation_2D() (InitDensitySummation_2D method)
InitDensitySummation_3D (class in mpacts.commands.continuum.sph_density)
InitDensitySummation_3D() (InitDensitySummation_3D method)
InitFilopodiaCommand (class in mpacts.commands.misc.lamellipodiumfront)
InitFilopodiaCommand() (InitFilopodiaCommand method)
InitFilopodiaDeformableCommand (class in mpacts.commands.misc.lamellipodiumfront)
InitFilopodiaDeformableCommand() (InitFilopodiaDeformableCommand method)
initial_condition() (mpacts.commands.continuum.compartmentmodeldiffusion.GridRD_2D method)
initialize() (mpacts.particles.particlecontainer.ParticleContainer method)
initialize_pc() (mpacts.particles.particlebase.ParticleBase class method)
initialize_triangle_bending_contacts() (in module mpacts.contact.models.bending.commonedge.initialize_triangle_bending_contacts)
InitParticleInTubeFlow (class in mpacts.predicates.predicates)
InitParticleInTubeFlow() (InitParticleInTubeFlow method)
InitPhotonLaunch (class in mpacts.predicates.lighttransport_predicates)
InitPhotonLaunch() (InitPhotonLaunch method)
InitPhotonPacket_Fiber (class in mpacts.predicates.lighttransport_predicates)
InitPhotonPacket_Fiber() (InitPhotonPacket_Fiber method)
InitRigidBodyRotationCommand (class in mpacts.commands.geometry.orientation)
InitRigidBodyRotationCommand() (InitRigidBodyRotationCommand method)
inner_loop() (DEMutilities.postprocessing.operators.operators.SegmentedAnalysisReader method)
input_values() (DEMutilities.determine_hertz_dissipative_coefficient.A_Determinator method)
IntArrayToRegularSparseGridCommand (class in mpacts.commands.geometry.regulargrid)
IntArrayToRegularSparseGridCommand() (IntArrayToRegularSparseGridCommand method)
IntegerProperty (class in mpacts.core.valueproperties)
IntegerProperty() (IntegerProperty method)
InternalNormalStiffnessCommand (class in mpacts.commands.force.body)
InternalNormalStiffnessCommand() (InternalNormalStiffnessCommand method)
InterpolatedOffsetPointMotionCommand (class in mpacts.commands.time_evolution.interpolatedmotion)
InterpolatedOffsetPointMotionCommand() (InterpolatedOffsetPointMotionCommand method)
InterpolatedPointMotionCommand (class in mpacts.commands.time_evolution.interpolatedmotion)
InterpolatedPointMotionCommand() (InterpolatedPointMotionCommand method)
InterpolatedQuaternionMotionCommand (class in mpacts.commands.time_evolution.interpolatedmotion)
InterpolatedQuaternionMotionCommand() (InterpolatedQuaternionMotionCommand method)
InterpolatedScalarMotionCommand (class in mpacts.commands.time_evolution.interpolatedmotion)
InterpolatedScalarMotionCommand() (InterpolatedScalarMotionCommand method)
InterpolatedVectorMotionCommand (class in mpacts.commands.time_evolution.interpolatedmotion)
InterpolatedVectorMotionCommand() (InterpolatedVectorMotionCommand method)
intersect_aabb() (in module DEMutilities.fill_mesh)
intersect_linesegment_quad() (in module mpacts.core.geometrysupport)
intersect_linesegment_triangle() (in module mpacts.core.geometrysupport)
intersect_quad_quad() (in module mpacts.core.geometrysupport)
intersect_quad_triangle() (in module mpacts.core.geometrysupport)
intersect_triangle_triangle() (in module mpacts.core.geometrysupport)
IntValue (class in mpacts.core.expression_cpp)
IntValue() (IntValue method)
invalidate_members() (mpacts.core.units.systems._Group method)
(mpacts.core.units.systems._System method)
invert() (in module DEMutilities.postprocessing.analysistools.clip)
invert_cmap() (in module DEMutilities.postprocessing.representation.cmap_tools)
is_cavity() (mpacts.geometrygenerators.meshobjects.MeshObject method)
is_close_to_absolute() (in module DEMutilities.numeric_functions)
is_close_to_relative() (in module DEMutilities.numeric_functions)
is_debug_version() (in module mpacts.core.configuration)
is_loading() (DEMutilities.CheckpointedSimulation.CheckpointedSimulation method)
is_mt() (in module mpacts.tools.setcontactdatastorage)
is_multiplicative (mpacts.core.units.converters.Converter attribute)
(mpacts.core.units.converters.OffsetConverter attribute)
(mpacts.core.units.converters.ScaleConverter attribute)
(mpacts.core.units.definitions.Definition attribute)
is_optional() (mpacts.core.propertybase.PropertyBase method)
is_parallel_compatible() (mpacts.contact.models.contactmodelbase.ContactModelBase method)
is_point_in_polygon() (in module mpacts.core.geometrysupport)
is_point_inside() (mpacts.geometrygenerators.meshobjects.MeshObject method)
is_point_on_line() (in module mpacts.core.geometrysupport)
is_regular() (mpacts.core.new_units.Unit method)
is_required() (mpacts.core.propertybase.PropertyBase method)
is_used_group() (mpacts.core.units.systems._Group method)
isBoundaryCorner() (mpacts.geometrygenerators.polyhedron.Connectivity method)
isBoundaryEdge() (mpacts.geometrygenerators.polyhedron.Connectivity method)
isConvexEdge() (mpacts.geometrygenerators.polyhedron.Connectivity method)
isidentifier() (in module mpacts.core.units.compat.tokenize)
isParallel() (in module mpacts.geometrygenerators.polyhedron)
isSamePlane() (in module mpacts.geometrygenerators.polyhedron)
isSmall() (in module mpacts.geometrygenerators.polyhedron)
isValidTriangleId() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
isValidVertexId() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
iter_used_groups() (mpacts.core.units.systems._Group method)
ito() (mpacts.core.units.quantity._Quantity method)
ito_base_units() (mpacts.core.units.quantity._Quantity method)
ito_root_units() (mpacts.core.units.quantity._Quantity method)

J

jet_colors() (in module DEMutilities.postprocessing.representation.cmap_tools)
json_serialise_data() (in module mpacts.io.datasave)
(in module mpacts.io.datasave_new)
(in module mpacts.io.save_load)
json_unserialise_data() (in module mpacts.io.datareader)
(in module mpacts.io.datasave_new)
(in module mpacts.io.save_load)

K

kill() (mpacts.core.arrays.ArrayManager method)
(mpacts.particles.particlebase.ParticleBase method)
kill_subparticle() (mpacts.core.indextranslator.IndexTranslator method)
kill_with_global() (mpacts.core.indextranslator.IndexTranslator method)
KillCommand (class in mpacts.commands.misc.lighttransport)
KillCommand() (KillCommand method)

L

LagTimeCommand (class in mpacts.commands.misc.cellcycle)
LagTimeCommand() (LagTimeCommand method)
LamellipodiumFrontCommand (class in mpacts.commands.misc.lamellipodiumfront)
LamellipodiumFrontCommand() (LamellipodiumFrontCommand method)
laplace_beltrami() (in module mpacts.geometrygenerators.laplace_beltrami)
last() (mpacts.core.command.CommandList method)
(mpacts.core.command.ParallelCommandList method)
(mpacts.core.command.TimedCommandList method)
(mpacts.core.command.VerboseCommandList method)
LatinHyperCubeDesign (class in DEMutilities.doe_samples)
LatinHyperCubeDesign() (LatinHyperCubeDesign method)
LayerBoundaryInteractionCommand (class in mpacts.commands.misc.lighttransport)
LayerBoundaryInteractionCommand() (LayerBoundaryInteractionCommand method)
layoutcreator (class in mpacts.sparkicles.layoutcreator)
layoutcreator() (layoutcreator method)
LazyRegistry (class in mpacts.core.units.registry)
LazyRegistry() (LazyRegistry method)
LDLTSolver (class in mpacts.contact.matrix.cmtypes)
LDLTSolver() (LDLTSolver method)
LeapFrog_Rotation (class in mpacts.commands.time_evolution.integration)
LeapFrog_Rotation() (LeapFrog_Rotation method)
LeapFrog_Translation (class in mpacts.commands.time_evolution.integration)
LeapFrog_Translation() (LeapFrog_Translation method)
levi_civita() (mpacts.core.new_units.QuantityVector method)
lex_sort_vals() (in module DEMutilities.analyze_parameter_study)
lhs() (in module DEMutilities.lhs_samples)
lhsFromDensity() (in module DEMutilities.lhs_samples)
lhsFromSample() (in module DEMutilities.lhs_samples)
LimitedRotationConstraint() (in module mpacts.boundaryconditions.rigid_body_constraints)
LimitedTranslationConstraint() (in module mpacts.boundaryconditions.rigid_body_constraints)
LinearChangeCommand (class in mpacts.commands.time_evolution.linearchange)
LinearChangeCommand() (LinearChangeCommand method)
LinearChangePointCommand (class in mpacts.commands.time_evolution.linearchange)
LinearChangePointCommand() (LinearChangePointCommand method)
LinearChangeVectorCommand (class in mpacts.commands.time_evolution.linearchange)
LinearChangeVectorCommand() (LinearChangeVectorCommand method)
LinearCombinationCommand (class in mpacts.commands.onarrays.linearcombination)
LinearCombinationCommand() (LinearCombinationCommand method)
LinearDampingForceCommand (class in mpacts.commands.force.body)
LinearDampingForceCommand() (LinearDampingForceCommand method)
LinearDampingMomentCommand (class in mpacts.commands.force.body)
LinearDampingMomentCommand() (LinearDampingMomentCommand method)
LinearStretchingTorqueCommand (class in mpacts.commands.force.body)
LinearStretchingTorqueCommand() (LinearStretchingTorqueCommand method)
LinearTensionInPlaneCommand (class in mpacts.commands.continuum.membrane)
LinearTensionInPlaneCommand() (LinearTensionInPlaneCommand method)
LineIndexValue (class in mpacts.core.expression_cpp)
LineIndexValue() (LineIndexValue method)
LiquidFrictionCommand (class in mpacts.contact.matrix.cmtypes)
LiquidFrictionCommand() (LiquidFrictionCommand method)
list_all_cmaps() (in module DEMutilities.postprocessing.representation.cmap_tools)
list_all_contactdetectors() (in module mpacts.tools.system_info)
list_children() (mpacts.core.baseobject.BaseObject method)
Lister (class in mpacts.core.units.systems)
Lister() (Lister method)
listPlanes() (in module mpacts.geometrygenerators.polyhedron)
load() (in module mpacts.io.save_load)
load_an_array() (DEMutilities.CheckpointedSimulation.CheckpointedSimulation method)
load_contactdata() (DEMutilities.CheckpointedSimulation.CheckpointedSimulation method)
load_mode (DEMutilities.CheckpointedSimulation.CheckpointedSimulation attribute)
load_parameters() (in module mpacts.tools.load_parameters)
load_pcNames() (mpacts.io.vtu_read.VtuState method)
load_pcNames_and_sizes() (mpacts.io.readerstatebase.ReaderStateBase method)
load_pickled_properties() (in module DEMutilities.enumerate_properties)
(in module mpacts.tools.load_parameters)
load_simulation() (in module DEMutilities.CheckpointedSimulation)
LoadDEMeterObject() (in module DEMutilities.GUI.Actions.DEMObjectLoader)
loads() (mpacts.io.serial_encoder_decoder.SerialEncoderDecoder method)
(mpacts.io.serial_encoder_decoder_new.SerialEncoderDecoder method)
local_to_global_index() (mpacts.core.indextranslator.IndexTranslator method)
(mpacts.core.particle.Particle method)
(mpacts.core.particle.ParticleCollection method)
log() (in module mpacts.core.expression)
logarithm (class in mpacts.core.expression_cpp)
logarithm() (logarithm method)
look_common_edge() (in module mpacts.geometrygenerators.trianglegeometries)
lookup() (mpacts.core.lut.LUT_1D_Scalar method)
(mpacts.core.lut.LUT_1D_Vector method)
(mpacts.core.lut.LUT_2D_Scalar method)
(mpacts.core.lut.LUT_2D_Vector method)
(mpacts.core.lut.LUT_3D_Scalar method)
(mpacts.core.lut.LUT_3D_Vector method)
(mpacts.core.lut.LUT_4D_Scalar method)
(mpacts.core.lut.LUT_4D_Vector method)
lookupVertex() (in module mpacts.geometrygenerators.polyhedron)
loop() (DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
lru_cache() (in module mpacts.core.units.compat.lrucache)
ls() (DEMutilities.postprocessing.h5storage.H5BaseEntry method)
LUT_1D_Scalar (class in mpacts.core.lut)
LUT_1D_Scalar() (LUT_1D_Scalar method)
LUT_1D_Vector (class in mpacts.core.lut)
LUT_1D_Vector() (LUT_1D_Vector method)
LUT_2D_Scalar (class in mpacts.core.lut)
LUT_2D_Scalar() (LUT_2D_Scalar method)
LUT_2D_Vector (class in mpacts.core.lut)
LUT_2D_Vector() (LUT_2D_Vector method)
LUT_3D_Scalar (class in mpacts.core.lut)
LUT_3D_Scalar() (LUT_3D_Scalar method)
LUT_3D_Vector (class in mpacts.core.lut)
LUT_3D_Vector() (LUT_3D_Vector method)
LUT_4D_Scalar (class in mpacts.core.lut)
LUT_4D_Scalar() (LUT_4D_Scalar method)
LUT_4D_Vector (class in mpacts.core.lut)
LUT_4D_Vector() (LUT_4D_Vector method)

M

m (mpacts.core.units.quantity._Quantity attribute)
m_as() (mpacts.core.units.quantity._Quantity method)
m_SI (mpacts.core.units.quantity._Quantity attribute)
mag() (in module DEMutilities.numeric_functions)
magnitude (mpacts.core.units.quantity._Quantity attribute)
magnitude() (in module mpacts.tools.arrayoperators)
magnitude_SI (mpacts.core.units.quantity._Quantity attribute)
magnitude_tuple (mpacts.core.units.quantity._Quantity attribute)
make_array_compatible() (in module mpacts.commands.misc.cellabscission)
make_axlab() (in module DEMutilities.postprocessing.representation.academic_representation)
(in module DEMutilities.postprocessing.representation.cnh_specific_representation)
make_BruteforceCD() (mpacts.contact.detectors.supercontactdetector.SuperContactDetectorAABB method)
make_canonical_AABB_generators() (in module mpacts.contact.detectors.make_canonical_aabb_generators)
make_canonical_MGrids() (in module mpacts.contact.detectors.make_canonical_aabb_generators)
make_CD() (mpacts.contact.detectors.supercontactdetector.SuperContactDetectorAABB method)
make_CG_solver() (in module mpacts.contact.matrix.pythontools)
make_DEMeter_models() (in module mpacts.io.reactions_from_sbml)
make_fig() (DEMutilities.postprocessing.plottools.mplsphereplotter.SpherePlotter method)
make_fullfactorial() (in module DEMutilities.doe_samples)
make_global_parameters() (in module DEMutilities.variables_from_files)
make_LDLT_solver() (in module mpacts.contact.matrix.pythontools)
make_leglab() (in module DEMutilities.postprocessing.representation.academic_representation)
make_lhs() (in module DEMutilities.doe_samples)
(in module DEMutilities.lhs_samples)
make_members() (mpacts.contact.detectors.supercontactdetector.SuperContactDetectorAABB method)
make_membrane_potentials() (in module mpacts.io.reactions_from_sbml)
make_MGridCD() (mpacts.contact.detectors.supercontactdetector.SuperContactDetectorAABB method)
make_reaction() (in module mpacts.io.reactions_from_sbml)
make_result_table() (in module DEMutilities.analyze_parameter_study)
make_SAPCD() (mpacts.contact.detectors.supercontactdetector.SuperContactDetectorAABB method)
make_species() (in module mpacts.io.reactions_from_sbml)
make_stl_normals_consistent() (in module DEMutilities.correct_stl_normals)
manager_size() (mpacts.particles.particlecontainer.ParticleContainer method)
ManagerAlivePrinter (class in mpacts.commands.monitors.progress)
ManagerAlivePrinter() (ManagerAlivePrinter method)
ManagerSizePrinter (class in mpacts.commands.monitors.progress)
ManagerSizePrinter() (ManagerSizePrinter method)
mask() (mpacts.core.arrays.ArrayManager method)
mask_first_elements() (in module DEMutilities.numeric_functions)
matrix_to_latex() (in module mpacts.core.units.formatting)
matrix_to_string() (in module mpacts.core.units.util)
MatrixProperty (class in mpacts.core.valueproperties)
MatrixProperty() (MatrixProperty method)
max() (in module mpacts.tools.arrayoperators)
max_size() (mpacts.commands.geometry.aabbgenerator.AABBGeneratorCommand method)
maximum_triangle_diameter() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
mayavi() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
mayavi2() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
maybe() (in module mpacts.core.units.compat.tokenize)
mean() (in module DEMutilities.numeric_functions)
(in module mpacts.tools.arrayoperators)
mean_fft_on_paths() (in module DEMutilities.postprocessing.analysistools.temporal.fourier)
MeanContactAreaCommand (class in mpacts.commands.misc.lamellipodiumfront)
MeanContactAreaCommand() (MeanContactAreaCommand method)
MeasureClusterSize() (DEMutilities.postprocessing.analysistools.spatial.clusters.ClusterAnalysis method)
median() (in module mpacts.tools.arrayoperators)
members (mpacts.core.units.systems._Group attribute)
(mpacts.core.units.systems._System attribute)
MeshBase (class in mpacts.core.mesh)
MeshBase() (MeshBase method)
MeshObject (class in mpacts.geometrygenerators.meshobjects)
MeshObject() (MeshObject method)
MGrid (class in mpacts.contact.detectors.multigrid_cd)
MGrid() (MGrid method)
min() (in module mpacts.tools.arrayoperators)
min_size() (mpacts.commands.geometry.aabbgenerator.AABBGeneratorCommand method)
minimal_edge_length() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
minimum_triangle_diameter() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
ModifyDiffusionMatrixCommand (class in mpacts.commands.misc.frictionmatrices)
ModifyDiffusionMatrixCommand() (ModifyDiffusionMatrixCommand method)
MolecularMotorParticleContainer (class in mpacts.particles.specialcases.molecularmotor)
MolecularMotorParticleContainer() (MolecularMotorParticleContainer method)
move() (DEMutilities.postprocessing.h5storage.H5Entry method)
MoveSubStepsCommand (class in mpacts.commands.misc.lighttransport)
MoveSubStepsCommand() (MoveSubStepsCommand method)
MovingAverageCommand (class in mpacts.commands.onarrays.average)
MovingAverageCommand() (MovingAverageCommand method)
mpacts_contactdatastorage_name() (in module mpacts.tools.system_info)
mpacts_cpp_compiler() (in module mpacts.tools.system_info)
mpacts_git_branch() (in module mpacts.tools.system_info)
mpacts_git_revision() (in module mpacts.tools.system_info)
mpacts_is_debug_version() (in module mpacts.tools.system_info)
mult() (mpacts.contact.matrix.cmoperators.ContactMatrixOperatorsBase method)
MultiGridContactDetector (class in mpacts.contact.detectors.multigrid)
(class in mpacts.contact.detectors.multigrid_cd)
MultiGridContactDetector() (MultiGridContactDetector method), [1]
Multiplication (class in mpacts.core.expression_cpp)
Multiplication() (Multiplication method)
multiply_quaternions() (in module mpacts.geometrygenerators.transformations)

N

n_active_elements() (mpacts.core.arrays.ArrayManager method)
n_alive_elements() (mpacts.core.arrays.Array method)
(mpacts.core.arrays.ArrayManager method)
name (mpacts.core.units.definitions.Definition attribute)
(mpacts.core.units.systems._Group attribute)
(mpacts.core.units.systems._System attribute)
name() (mpacts.core.baseobject.BaseObject method)
nCorners() (mpacts.geometrygenerators.polyhedron.Connectivity method)
(mpacts.geometrygenerators.polyhedron.Polyhedron method)
ndarray_to_latex() (in module mpacts.core.units.formatting)
ndarray_to_latex_parts() (in module mpacts.core.units.formatting)
nEdges() (mpacts.geometrygenerators.polyhedron.Connectivity method)
(mpacts.geometrygenerators.polyhedron.Polyhedron method)
Negate (class in mpacts.core.expression_cpp)
Negate() (Negate method)
neutralfunc() (in module DEMutilities.postprocessing.h5storage)
next() (mpacts.core.units.util.BlockIterator method)
(mpacts.core.units.util.SourceIterator method)
NoContactStateBruteForce (class in mpacts.contact.detectors.bruteforce)
NoContactStateBruteForce() (NoContactStateBruteForce method)
node_area() (in module mpacts.geometrygenerators.laplace_beltrami)
node_normal() (in module mpacts.geometrygenerators.laplace_beltrami)
NodeDragAttempt (class in mpacts.commands.geometry.submergedvolume)
NodeDragAttempt() (NodeDragAttempt method)
Nodes (class in mpacts.sparkicles.layoutcreator)
Nodes() (Nodes method)
non_inherited_unit_names (mpacts.core.units.systems._Group attribute)
nonefunc() (in module DEMutilities.fill_mesh)
norm() (in module DEMutilities.numeric_functions)
(mpacts.core.new_units.QuantityVector method)
norm_sq() (in module DEMutilities.numeric_functions)
(in module mpacts.geometrygenerators.pointgenerators)
normal() (in module mpacts.geometrygenerators.polyhedron)
(mpacts.geometrygenerators.polyhedron.Polyhedron method)
normal_area() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
normal_triangle() (in module mpacts.core.geometrysupport)
normalize() (in module DEMutilities.numeric_functions)
normalize_constraints() (in module mpacts.boundaryconditions.rigid_body_constraints)
NormalizeParentArrayWithChildCount (class in mpacts.commands.onarrays.transfer)
NormalizeParentArrayWithChildCount() (NormalizeParentArrayWithChildCount method)
normals() (mpacts.geometrygenerators.meshobjects.MeshObject method)
NormalVolumePressureCommand (class in mpacts.commands.continuum.membrane)
NormalVolumePressureCommand() (NormalVolumePressureCommand method)
NOT() (in module mpacts.predicates.shortened_predicates)
NotGate (class in mpacts.core.command)
NotGate() (NotGate method)
np_3x3_to_Symmetric() (in module mpacts.contact.matrix.pythontools)
np_matrix_to_ContactMatrix() (in module mpacts.contact.matrix.pythontools)
np_matrix_to_single_ContactMatrix() (in module mpacts.contact.matrix.pythontools)
np_print_max() (in module mpacts.contact.matrix.pythontools)
np_reset_print() (in module mpacts.contact.matrix.pythontools)
np_submatrix_3x3() (in module mpacts.contact.matrix.pythontools)
nTriangles() (mpacts.geometrygenerators.polyhedron.Connectivity method)
(mpacts.geometrygenerators.polyhedron.Polyhedron method)
NullHandler (class in mpacts.core.units.compat.nullhandler)
NullHandler() (NullHandler method)
number_of_contacts() (mpacts.core.contactdata.ContactDataBase method)
nVertices() (mpacts.geometrygenerators.polyhedron.Polyhedron method)

O

obj_to_stl() (in module mpacts.io.savefiles)
OffsetConverter (class in mpacts.core.units.converters)
OffsetConverter() (OffsetConverter method)
offsetList() (in module mpacts.geometrygenerators.polyhedron)
OffsetUnitCalculusError (class in mpacts.core.units.errors)
OffsetUnitCalculusError() (OffsetUnitCalculusError method)
OneContactPerModelCollector (class in mpacts.contact.detectors.onecontactpermodelcollector)
OneContactPerModelCollector() (OneContactPerModelCollector method)
oneParticlePerPrimitive() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
open() (in module mpacts.core.units.compat.tokenize)
OperatorBase (class in DEMutilities.postprocessing.operators.operators)
OperatorBase() (OperatorBase method)
optimize_bandwidth() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
OptimizeBandwidth (class in mpacts.commands.misc.optimizebandwidth)
OptimizeBandwidth() (OptimizeBandwidth method)
optional (mpacts.particles.particlebase.ParticleBase attribute)
OR() (in module mpacts.predicates.shortened_predicates)
ordered_series() (DEMutilities.postprocessing.representation.academic_representation.AcademicRepresentationSet method)
OrGates (class in mpacts.core.command)
OrGates() (OrGates method)
OrientToMeanCommand (class in mpacts.commands.geometry.orientation)
OrientToMeanCommand() (OrientToMeanCommand method)
OutOfRangeCommand (class in mpacts.commands.monitors.debug)
OutOfRangeCommand() (OutOfRangeCommand method)

P

pack() (mpacts.core.arrays.ArrayManager method)
pairs() (DEMutilities.postprocessing.representation.academic_representation.AcademicRepresentationSet method)
parallel_configuration() (in module mpacts.core.configuration)
ParallelCommandList (class in mpacts.core.command)
ParallelCommandList() (ParallelCommandList method)
ParallelConfiguration (class in mpacts.core.configuration)
ParallelConfiguration() (ParallelConfiguration method)
parent_mean() (in module mpacts.commands.onparticles.parentmean)
parent_node() (mpacts.core.baseobject.BaseObject method)
parse_jpk_section() (in module DEMutilities.afmtools.import_afm_data)
Particle (class in mpacts.core.particle)
Particle() (Particle method)
ParticleBase (class in mpacts.particles.particlebase)
ParticleBase() (ParticleBase method)
ParticleCollection (class in mpacts.core.particle)
ParticleCollection() (ParticleCollection method)
ParticleContainer (class in mpacts.particles.particlecontainer)
ParticleContainer() (ParticleContainer method)
partition() (in module mpacts.contact.matrix.pythontools)
parts (mpacts.particles.particlebase.ParticleBase attribute)
path() (mpacts.core.baseobject.BaseObject method)
pc1() (mpacts.contact.models.pycontactmodel.PythonContactModel method)
pc2() (mpacts.contact.models.pycontactmodel.PythonContactModel method)
pcNames() (mpacts.io.readerstatebase.ReaderStateBase method)
PCStatisticsCommand (class in mpacts.commands.monitors.debug)
PCStatisticsCommand() (PCStatisticsCommand method)
perform() (mpacts.core.expression_cpp.Expression method)
perform_contactmodel() (mpacts.contact.detectors.contactdetectorbase.ContactDetectorBase method)
PeriodicBoundary1D (class in mpacts.boundaryconditions.periodicboundary1D)
PeriodicBoundary1D() (PeriodicBoundary1D method)
PeripheryCommand (class in mpacts.commands.misc.lamellipodiumfront)
PeripheryCommand() (PeripheryCommand method)
perpendicular_to() (DEMutilities.postprocessing.plottools.mplsphereplotter.SpherePlotter method)
pi_theorem() (in module mpacts.core.units.util)
pick_point_on_unit_sphere() (in module mpacts.geometrygenerators.pointgenerators)
pickle_properties() (in module DEMutilities.enumerate_properties)
PIDControllerCommand (class in mpacts.commands.time_evolution.controllers)
PIDControllerCommand() (PIDControllerCommand method)
pie() (DEMutilities.postprocessing.representation.academic_representation.AcademicRepresentationSet method)
PlaneStressInducedForcesCommand (class in mpacts.commands.force.continuum)
PlaneStressInducedForcesCommand() (PlaneStressInducedForcesCommand method)
plot() (DEMutilities.postprocessing.plottools.mplsphereplotter.SpherePlotter method)
(DEMutilities.postprocessing.representation.academic_representation.AcademicRepresentationSet method)
plus_minus() (mpacts.core.units.quantity._Quantity method)
point_in_infinte_cylinder() (in module DEMutilities.numeric_functions)
point_in_sphere() (in module DEMutilities.numeric_functions)
point_to_cell() (in module DEMutilities.numeric_functions)
PointInCylinderGen (class in mpacts.predicates.predicates)
PointInCylinderGen() (PointInCylinderGen method)
PointOnSphereGen (class in mpacts.predicates.predicates)
PointOnSphereGen() (PointOnSphereGen method)
PointValue (class in mpacts.core.expression_cpp)
PointValue() (PointValue method)
polar() (DEMutilities.postprocessing.representation.cnh_specific_representation.CNH_Specific_RepresentationSet method)
Polyhedron (class in mpacts.geometrygenerators.polyhedron)
Polyhedron() (Polyhedron method)
PolymerizationCommand (class in mpacts.commands.onparticles.create_remove)
PolymerizationCommand() (PolymerizationCommand method)
post_execute() (DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
Power (class in mpacts.core.expression_cpp)
Power() (Power method)
Predicate_AbovePlane (class in mpacts.predicates.predicates)
Predicate_AbovePlane() (Predicate_AbovePlane method)
Predicate_AlwaysTrue (class in mpacts.predicates.predicates)
Predicate_AlwaysTrue() (Predicate_AlwaysTrue method)
Predicate_AND (class in mpacts.predicates.predicates)
Predicate_AND() (Predicate_AND method)
Predicate_BelowPlane (class in mpacts.predicates.predicates)
Predicate_BelowPlane() (Predicate_BelowPlane method)
Predicate_BinaryFissionFinished (class in mpacts.predicates.cellcycle_predicates)
Predicate_BinaryFissionFinished() (Predicate_BinaryFissionFinished method)
Predicate_BinaryFissionFinished_Spheroid (class in mpacts.predicates.cellcycle_predicates)
Predicate_BinaryFissionFinished_Spheroid() (Predicate_BinaryFissionFinished_Spheroid method)
Predicate_BuddingFinished (class in mpacts.predicates.cellcycle_predicates)
Predicate_BuddingFinished() (Predicate_BuddingFinished method)
Predicate_Debug (class in mpacts.predicates.predicates)
Predicate_Debug() (Predicate_Debug method)
Predicate_GrowthCapsuleFinished (class in mpacts.predicates.cellcycle_predicates)
Predicate_GrowthCapsuleFinished() (Predicate_GrowthCapsuleFinished method)
Predicate_GrowthQuFinished (class in mpacts.predicates.cellcycle_predicates)
Predicate_GrowthQuFinished() (Predicate_GrowthQuFinished method)
Predicate_InBox (class in mpacts.predicates.predicates)
Predicate_InBox() (Predicate_InBox method)
Predicate_InCylinder (class in mpacts.predicates.predicates)
Predicate_InCylinder() (Predicate_InCylinder method)
Predicate_IndexArray (class in mpacts.predicates.predicates)
Predicate_IndexArray() (Predicate_IndexArray method)
Predicate_IndexArray_Alive (class in mpacts.predicates.predicates)
Predicate_IndexArray_Alive() (Predicate_IndexArray_Alive method)
Predicate_IndexArraysEqual (class in mpacts.predicates.predicates)
Predicate_IndexArraysEqual() (Predicate_IndexArraysEqual method)
Predicate_Indices (class in mpacts.predicates.predicates)
Predicate_Indices() (Predicate_Indices method)
Predicate_InEllipse2D (class in mpacts.predicates.predicates)
Predicate_InEllipse2D() (Predicate_InEllipse2D method)
Predicate_InSphere (class in mpacts.predicates.predicates)
Predicate_InSphere() (Predicate_InSphere method)
Predicate_IntArray_Alive (class in mpacts.predicates.predicates)
Predicate_IntArray_Alive() (Predicate_IntArray_Alive method)
Predicate_IntegerArray (class in mpacts.predicates.predicates)
Predicate_IntegerArray() (Predicate_IntegerArray method)
Predicate_NOT (class in mpacts.predicates.predicates)
Predicate_NOT() (Predicate_NOT method)
Predicate_OR (class in mpacts.predicates.predicates)
Predicate_OR() (Predicate_OR method)
Predicate_ParentScalarArray (class in mpacts.predicates.predicates)
Predicate_ParentScalarArray() (Predicate_ParentScalarArray method)
Predicate_ParticleIndex (class in mpacts.predicates.predicates)
Predicate_ParticleIndex() (Predicate_ParticleIndex method)
Predicate_Point_IsInf (class in mpacts.predicates.predicates)
Predicate_Point_IsInf() (Predicate_Point_IsInf method)
Predicate_Point_IsNaN (class in mpacts.predicates.predicates)
Predicate_Point_IsNaN() (Predicate_Point_IsNaN method)
Predicate_PointArray (class in mpacts.predicates.predicates)
Predicate_PointArray() (Predicate_PointArray method)
Predicate_Random (class in mpacts.predicates.predicates)
Predicate_Random() (Predicate_Random method)
Predicate_Scalar_IsInf (class in mpacts.predicates.predicates)
Predicate_Scalar_IsInf() (Predicate_Scalar_IsInf method)
Predicate_Scalar_IsNaN (class in mpacts.predicates.predicates)
Predicate_Scalar_IsNaN() (Predicate_Scalar_IsNaN method)
Predicate_ScalarArray (class in mpacts.predicates.predicates)
Predicate_ScalarArray() (Predicate_ScalarArray method)
Predicate_SetIndex (class in mpacts.predicates.predicates)
Predicate_SetIndex() (Predicate_SetIndex method)
Predicate_SetInt (class in mpacts.predicates.predicates)
Predicate_SetInt() (Predicate_SetInt method)
Predicate_SetPoint (class in mpacts.predicates.predicates)
Predicate_SetPoint() (Predicate_SetPoint method)
Predicate_SetScalar (class in mpacts.predicates.predicates)
Predicate_SetScalar() (Predicate_SetScalar method)
Predicate_SetVector (class in mpacts.predicates.predicates)
Predicate_SetVector() (Predicate_SetVector method)
Predicate_StateSaver (class in mpacts.predicates.predicates)
Predicate_StateSaver() (Predicate_StateSaver method)
Predicate_StochasticSwitch (class in mpacts.predicates.predicates)
Predicate_StochasticSwitch() (Predicate_StochasticSwitch method)
Predicate_Stress (class in mpacts.predicates.predicates)
Predicate_Stress() (Predicate_Stress method)
Predicate_Vector_IsInf (class in mpacts.predicates.predicates)
Predicate_Vector_IsInf() (Predicate_Vector_IsInf method)
Predicate_Vector_IsNaN (class in mpacts.predicates.predicates)
Predicate_Vector_IsNaN() (Predicate_Vector_IsNaN method)
Predicate_VectorArray (class in mpacts.predicates.predicates)
Predicate_VectorArray() (Predicate_VectorArray method)
Predicate_XOR (class in mpacts.predicates.predicates)
Predicate_XOR() (Predicate_XOR method)
PredicateAction_StoreElement (class in mpacts.predicates.predicates)
PredicateAction_StoreElement() (PredicateAction_StoreElement method)
PredicateAction_StoreParticleElements (class in mpacts.predicates.predicates)
PredicateAction_StoreParticleElements() (PredicateAction_StoreParticleElements method)
PredicateActionChainer (class in mpacts.predicates.predicates)
PredicateActionChainer() (PredicateActionChainer method)
PredicateBase (class in mpacts.predicates.predicates)
PredicateBase() (PredicateBase method)
PredicateCounterCommand (class in mpacts.commands.monitors.checkpredicate)
PredicateCounterCommand() (PredicateCounterCommand method)
PredicatedContactModel (class in mpacts.contact.models.misc.predicatedcontactmodel)
PredicatedContactModel() (PredicatedContactModel method)
PrefixDefinition (class in mpacts.core.units.definitions)
PrefixDefinition() (PrefixDefinition method)
PrincipalStressCommand (class in mpacts.commands.misc.stresstensor)
PrincipalStressCommand() (PrincipalStressCommand method)
print_command_tree() (mpacts.core.simulation.Simulation method)
print_debugging_info() (mpacts.contact.detectors.multigrid_cd.MultiGridContactDetector method)
print_entries() (DEMutilities.postprocessing.h5storage.H5BaseEntry method)
print_matrix() (mpacts.contact.matrix.cmoperators.ContactMatrixOperatorsR3 method)
print_tree() (mpacts.core.baseobject.BaseObject method)
PrintArrayCmd (class in mpacts.commands.misc.cellabscission)
PrintArrayCmd() (PrintArrayCmd method)
Printer (class in DEMutilities.postprocessing.operators.operators)
Printer() (DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
(Printer method)
PrinterBase (class in mpacts.commands.monitors.progress)
PrinterBase() (PrinterBase method)
PrinterChain (class in mpacts.commands.monitors.progress)
PrinterChain() (PrinterChain method)
PrintIndexArrayCommand (class in mpacts.commands.monitors.debug)
PrintIndexArrayCommand() (PrintIndexArrayCommand method)
PrintProgress() (mpacts.commands.monitors.progress.ArrayAtIndexPrinter method)
(mpacts.commands.monitors.progress.ArrayBoundsPrinter method)
(mpacts.commands.monitors.progress.ArrayMaxMagnitudePrinter method)
(mpacts.commands.monitors.progress.ArrayMaxPrinter method)
(mpacts.commands.monitors.progress.ArrayMeanPrinter method)
(mpacts.commands.monitors.progress.ArrayMinPrinter method)
(mpacts.commands.monitors.progress.ArraySumPrinter method)
(mpacts.commands.monitors.progress.CpuTimePrinter method)
(mpacts.commands.monitors.progress.DefaultProgressPrinter method)
(mpacts.commands.monitors.progress.ManagerAlivePrinter method)
(mpacts.commands.monitors.progress.ManagerSizePrinter method)
(mpacts.commands.monitors.progress.PrinterBase method)
(mpacts.commands.monitors.progress.PrinterChain method)
(mpacts.commands.monitors.progress.PropertyPrinter method)
(mpacts.commands.monitors.progress.ShortProgressPrinter method)
(mpacts.commands.monitors.progress.StepPrinter method)
PrintScalarArrayCommand (class in mpacts.commands.monitors.debug)
PrintScalarArrayCommand() (PrintScalarArrayCommand method)
PrintVectorArrayCommand (class in mpacts.commands.monitors.debug)
PrintVectorArrayCommand() (PrintVectorArrayCommand method)
probe_at_particles() (mpacts.commands.continuum.compartmentmodeldiffusion.GridRD_2D method)
process_elapsed_time() (in module mpacts.tools.system_info)
process_n_threads() (in module mpacts.tools.system_info)
process_peak_memory() (in module mpacts.tools.system_info)
process_system_time() (in module mpacts.tools.system_info)
process_user_time() (in module mpacts.tools.system_info)
ProcessDewetLevelsCommand (class in mpacts.commands.misc.dewet)
ProcessDewetLevelsCommand() (ProcessDewetLevelsCommand method)
ProcessRayCommand (class in DEMutilities.postprocessing.analysistools.clip)
ProcessRayCommand() (ProcessRayCommand method)
produce_random_seed() (in module mpacts.tools.random_seed)
ProgressIndicator (class in mpacts.commands.monitors.progress)
ProgressIndicator() (ProgressIndicator method)
ProgressIndicatorCommand (class in mpacts.commands.monitors.progress)
ProgressIndicatorCommand() (ProgressIndicatorCommand method)
proj_within_segment() (in module DEMutilities.postprocessing.analysistools.clip)
project_to_beam() (in module mpacts.geometrygenerators.transformations)
project_to_circle() (in module mpacts.geometrygenerators.transformations)
project_to_plane() (in module DEMutilities.numeric_functions)
project_to_sphere() (in module mpacts.geometrygenerators.polyhedron)
project_to_unitvector() (in module DEMutilities.numeric_functions)
projection_is_within_segment() (in module DEMutilities.numeric_functions)
ProjectNewMeshCommand (class in mpacts.commands.geometry.triangle)
ProjectNewMeshCommand() (ProjectNewMeshCommand method)
prop_checker_cdb_() (in module DEMutilities.CheckpointedSimulation)
prop_checker_pc_() (in module DEMutilities.CheckpointedSimulation)
property_dictionary() (in module DEMutilities.enumerate_properties)
property_dictionary_printable_values() (in module DEMutilities.enumerate_properties)
property_dictionary_values() (in module DEMutilities.enumerate_properties)
PropertyBase (class in mpacts.core.propertybase)
PropertyBase() (PropertyBase method)
PropertyPrinter (class in mpacts.commands.monitors.progress)
PropertyPrinter() (PropertyPrinter method)
PrunedFixedListContactDetector (class in mpacts.contact.detectors.fixedlist)
PrunedFixedListContactDetector() (PrunedFixedListContactDetector method)
PushScalarVectorCommand (class in mpacts.commands.misc.pushscalarvector)
PushScalarVectorCommand() (PushScalarVectorCommand method)
put() (mpacts.core.units.quantity._Quantity method)
PyContactModelBase (class in mpacts.contact.models.pycontactmodelbase)
PyContactModelBase() (PyContactModelBase method)
pyProperties (class in mpacts.tools.pyProperties)
pyProperties() (pyProperties method)
python_object() (mpacts.contact.models.pycontactmodel.PythonContactModel method)
(mpacts.core.command.PythonCommand method)
PythonCommand (class in mpacts.core.command)
PythonCommand() (PythonCommand method)
PythonContactModel (class in mpacts.contact.models.pycontactmodel)
PythonContactModel() (PythonContactModel method)
PythonFunctionCommand (class in mpacts.core.command)
PythonFunctionCommand() (PythonFunctionCommand method)
PythonObjectProperty (class in mpacts.core.valueproperties)
PythonObjectProperty() (PythonObjectProperty method)

Q

QuadIndexValue (class in mpacts.core.expression_cpp)
QuadIndexValue() (QuadIndexValue method)
QuantityBase (class in mpacts.core.new_units)
QuantityBase() (QuantityBase method)
QuantityMatrix (class in mpacts.core.new_units)
QuantityMatrix() (QuantityMatrix method)
QuantityScalar (class in mpacts.core.new_units)
QuantityScalar() (QuantityScalar method)
QuantitySymmetricMatrix (class in mpacts.core.new_units)
QuantitySymmetricMatrix() (QuantitySymmetricMatrix method)
QuantityVector (class in mpacts.core.new_units)
QuantityVector() (QuantityVector method)
quaternion_from_matrix() (in module mpacts.geometrygenerators.transformations)
quaternion_to_rotation_matrix() (in module mpacts.geometrygenerators.transformations)
QuaternionProperty (class in mpacts.core.valueproperties)
QuaternionProperty() (QuaternionProperty method)
QuaternionValue (class in mpacts.core.expression_cpp)
QuaternionValue() (QuaternionValue method)
QuiescenceCommand (class in mpacts.commands.misc.cellcycle)
QuiescenceCommand() (QuiescenceCommand method)
QuinticSpline2D (class in mpacts.core.smoothingkernels)
QuinticSpline2D() (QuinticSpline2D method)
QuinticSpline3D (class in mpacts.core.smoothingkernels)
QuinticSpline3D() (QuinticSpline3D method)

R

RadialDistributionFunction (class in DEMutilities.postprocessing.analysistools.spatial.rdf)
RadialDistributionFunction() (RadialDistributionFunction method)
rand_quaternion() (in module mpacts.geometrygenerators.transformations)
rand_rotation_matrix() (in module mpacts.geometrygenerators.transformations)
random_mask() (in module DEMutilities.numeric_functions)
random_points_beam() (in module mpacts.geometrygenerators.pointgenerators)
random_points_sphere() (in module mpacts.geometrygenerators.pointgenerators)
random_raw() (in module mpacts.core.rng)
random_subset() (in module DEMutilities.numeric_functions)
random_uniform() (in module mpacts.core.rng)
RandomForceCommand (class in mpacts.commands.force.random)
RandomForceCommand() (RandomForceCommand method)
randomize() (in module mpacts.commands.misc.splitcapsule)
RandomNumberGeneratorConfiguration (class in mpacts.core.configuration)
RandomNumberGeneratorConfiguration() (RandomNumberGeneratorConfiguration method)
RandomScalarCommand (class in mpacts.commands.onarrays.setvalue)
RandomScalarCommand() (RandomScalarCommand method)
RandomWalkInPlaneCommand (class in mpacts.commands.geometry.orientation)
RandomWalkInPlaneCommand() (RandomWalkInPlaneCommand method)
rank_restr() (in module DEMutilities.lhs_samples)
Re() (in module mpacts.contact.models.deprecated.ellipsoid_contact_force)
read_and_set_time() (mpacts.io.csv_read.CSV_State method)
read_cgal() (in module mpacts.io.filereaders)
read_dotmesh() (in module mpacts.io.filereaders)
read_obj() (in module mpacts.io.filereaders)
read_oldDEMeter() (in module mpacts.io.filereaders)
read_sbml() (in module mpacts.io.reactions_from_sbml)
read_sol() (in module mpacts.io.filereaders)
read_stl() (in module mpacts.io.filereaders)
read_tetgen() (in module mpacts.io.filereaders)
ReaderStateBase (class in mpacts.io.readerstatebase)
ReaderStateBase() (ReaderStateBase method)
real (mpacts.core.units.quantity._Quantity attribute)
reconstruct_kwargs() (in module mpacts.io.save_load)
RecordEnergyCommand (class in mpacts.commands.misc.recordenergy)
RecordEnergyCommand() (RecordEnergyCommand method)
Recorder (class in DEMutilities.postprocessing.operators.operators)
Recorder() (DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
(Recorder method)
RecycleCommand (class in mpacts.commands.misc.lighttransport)
RecycleCommand() (RecycleCommand method)
RedefinitionError (class in mpacts.core.units.errors)
RedefinitionError() (RedefinitionError method)
ReduceSphereVolumeBasedOnAliveFractionCommand (class in mpacts.commands.geometry.sphere)
ReduceSphereVolumeBasedOnAliveFractionCommand() (ReduceSphereVolumeBasedOnAliveFractionCommand method)
ReflectSphereCommand (class in mpacts.commands.onarrays.transfer)
ReflectSphereCommand() (ReflectSphereCommand method)
register() (mpacts.core.new_units.UnitRegister method)
registerCommonTypes() (in module mpacts.core.arrays)
registerExtractors() (in module mpacts.core.extractors)
RegisterObject() (mpacts.core.conceptbase.ConceptBase method)
RegularFullGrid_Int (class in mpacts.core.mesh)
RegularFullGrid_Int() (RegularFullGrid_Int method)
RegularFullGrid_Scalar (class in mpacts.core.mesh)
RegularFullGrid_Scalar() (RegularFullGrid_Scalar method)
RegularFullGrid_Vector (class in mpacts.core.mesh)
RegularFullGrid_Vector() (RegularFullGrid_Vector method)
RegularSparseGrid_Int (class in mpacts.core.mesh)
RegularSparseGrid_Int() (RegularSparseGrid_Int method)
RegularSparseGrid_Scalar (class in mpacts.core.mesh)
RegularSparseGrid_Scalar() (RegularSparseGrid_Scalar method)
RegularSparseGrid_Vector (class in mpacts.core.mesh)
RegularSparseGrid_Vector() (RegularSparseGrid_Vector method)
RegularSparseGridToScalarArrayCommand (class in mpacts.commands.geometry.regulargrid)
RegularSparseGridToScalarArrayCommand() (RegularSparseGridToScalarArrayCommand method)
reinit_number_contacts() (DEMutilities.postprocessing.analysistools.spatial.countcontacts.CountContactSpheres method)
(DEMutilities.postprocessing.analysistools.spatial.countcontacts.CountContactsWithMesh method)
reject_to_unitvector() (in module DEMutilities.numeric_functions)
rel (mpacts.core.units.measurement._Measurement attribute)
relation_to_context (mpacts.core.units.context.Context attribute)
Remove() (mpacts.core.conceptbase.ConceptBase method)
remove_axis() (in module DEMutilities.postprocessing.representation.academic_representation)
remove_child() (mpacts.core.baseobject.BaseObject method)
remove_commands() (mpacts.boundaryconditions.periodicboundary1D.PeriodicBoundary1D method)
remove_contact() (mpacts.contact.detectors.onecontactpermodelcollector.OneContactPerModelCollector method)
remove_custom_flags() (in module mpacts.core.units.formatting)
remove_data() (DEMutilities.postprocessing.h5storage.H5Entry method)
remove_duplicate_vertices() (mpacts.geometrygenerators.meshobjects.TriangleMeshObject method)
remove_groups() (mpacts.core.units.systems._Group method)
(mpacts.core.units.systems._System method)
remove_particle() (mpacts.core.particle.Particle method)
remove_transformation() (mpacts.core.units.context.Context method)
remove_units() (mpacts.core.units.systems._Group method)
RemoveConstraint() (in module mpacts.boundaryconditions.rigid_body_constraints)
removeEdge() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
removeEdgesWithVertexIndex() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
RemoveParentCommand (class in mpacts.commands.onparticles.create_remove)
RemoveParentCommand() (RemoveParentCommand method)
RemoveParticlesCommand (class in mpacts.commands.onparticles.create_remove)
RemoveParticlesCommand() (RemoveParticlesCommand method)
removeTriangle() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
removeTriangleDuplicates() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
removeTrianglesWithVertexIndex() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
removeUnusedVertices() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
removeVertex() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
removeVertexDoubles() (in module mpacts.geometrygenerators.polyhedron)
removeVertexDuplicates() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
removeVerticesLargerThan() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
removeVerticesSmallerThan() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
rename() (mpacts.core.baseobject.BaseObject method)
reorder_with_new_positions() (mpacts.core.arrays.ArrayManager method)
reorder_with_old_positions() (mpacts.core.arrays.ArrayManager method)
reparent() (mpacts.core.indextranslator.IndexTranslator method)
repeat_vector_element() (in module DEMutilities.numeric_functions)
repr_serialise_data() (in module mpacts.io.save_load)
represent() (DEMutilities.postprocessing.representation.default_representation.RepresentationSet method)
(DEMutilities.postprocessing.representation.representationbase.RepresentationSetBase method)
RepresentationSet (class in DEMutilities.postprocessing.representation.default_representation)
RepresentationSet() (RepresentationSet method)
RepresentationSetBase (class in DEMutilities.postprocessing.representation.representationbase)
RepresentationSetBase() (RepresentationSetBase method)
required (mpacts.particles.particlebase.ParticleBase attribute)
requires_offset_translation (mpacts.particles.particlebase.ParticleBase attribute)
RescaleArrayCommand (class in mpacts.commands.onarrays.rescale)
RescaleArrayCommand() (RescaleArrayCommand method)
RescaleBoundedCommand (class in mpacts.commands.onarrays.rescale)
RescaleBoundedCommand() (RescaleBoundedCommand method)
reset() (DEMutilities.postprocessing.analysistools.spatial.countcontacts.CountContactsWithMesh method)
(DEMutilities.postprocessing.operators.operators.Accumulator method)
(DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
(DEMutilities.postprocessing.operators.operators.Counter method)
(DEMutilities.postprocessing.operators.operators.OperatorBase method)
(DEMutilities.postprocessing.operators.operators.Recorder method)
(DEMutilities.postprocessing.operators.operators.StandardDeviationEstimator method)
(DEMutilities.postprocessing.plottools.mplsphereplotter.SpherePlotter method)
(mpacts.commands.monitors.progress.CpuTimePrinter method)
(mpacts.commands.monitors.progress.DefaultProgressPrinter method)
(mpacts.commands.monitors.progress.PrinterBase method)
(mpacts.commands.monitors.progress.PrinterChain method)
reset_commandlist_timers() (DEMutilities.commandlist_converter.CommandListConverter method)
reset_contact_data() (in module mpacts.contact.matrix.pythontools)
(mpacts.contact.matrix.cmtypes.CombinedContactDataMatrix method)
(mpacts.contact.matrix.cmtypes.CombinedOffDiagonalMatrix method)
resize() (mpacts.core.arrays.ArrayManager method)
resolve_surrounding_normals() (in module mpacts.geometrygenerators.trianglegeometries)
resolve_surrounding_normals_front() (in module mpacts.geometrygenerators.trianglegeometries)
result_dictionaries() (in module DEMutilities.analyze_parameter_study)
return_5() (DEMutilities.determine_hertz_dissipative_coefficient.A_Determinator method)
return_variable_value() (DEMutilities.variables_from_files.VariableExtractor method)
ReuseExistingContactDetector (class in mpacts.contact.detectors.reuse_existing)
ReuseExistingContactDetector() (ReuseExistingContactDetector method)
RigidBodies (class in mpacts.sparkicles.layoutcreator)
RigidBodies() (RigidBodies method)
RigidBodyViscousDeformationCommand (class in mpacts.commands.time_evolution.rigidbodycreep)
RigidBodyViscousDeformationCommand() (RigidBodyViscousDeformationCommand method)
RigidCapsules (class in mpacts.sparkicles.layoutcreator)
RigidCapsules() (RigidCapsules method)
RigidCylinderDiffusionMatrixCommand (class in mpacts.commands.misc.frictionmatrices)
RigidCylinderDiffusionMatrixCommand() (RigidCylinderDiffusionMatrixCommand method)
RigidQuads (class in mpacts.sparkicles.layoutcreator)
RigidQuads() (RigidQuads method)
RigidSpherocylinderDiffusionMatrixCommand (class in mpacts.commands.misc.frictionmatrices)
RigidSpherocylinderDiffusionMatrixCommand() (RigidSpherocylinderDiffusionMatrixCommand method)
RigidTriangles (class in mpacts.sparkicles.layoutcreator)
RigidTriangles() (RigidTriangles method)
rjust() (in module DEMutilities.numeric_functions)
rng_configuration() (in module mpacts.core.configuration)
root_cubic() (in module mpacts.core.tiny)
root_linear() (in module mpacts.core.tiny)
root_node() (mpacts.core.baseobject.BaseObject method)
root_quadratic() (in module mpacts.core.tiny)
root_quartic() (in module mpacts.core.tiny)
rotate() (in module mpacts.geometrygenerators.transformations)
(mpacts.geometrygenerators.meshobjects.MeshObject method)
(mpacts.geometrygenerators.polyhedron.Polyhedron method)
rotate_array_to_element0() (in module mpacts.geometrygenerators.laplace_beltrami)
rotate_by_axis_and_angle() (mpacts.geometrygenerators.meshobjects.MeshObject method)
rotate_to_principal() (in module mpacts.geometrygenerators.transformations)
RotateBodyCommand (class in mpacts.commands.time_evolution.rotatebody)
RotateBodyCommand() (RotateBodyCommand method)
rotateList() (in module mpacts.geometrygenerators.polyhedron)
RotateNormalsCommand (class in mpacts.commands.geometry.transformcontrolpoints)
RotateNormalsCommand() (RotateNormalsCommand method)
rotateObj() (mpacts.geometrygenerators.boolean3Dshapegenerator.Boolean3DShapeGenerator method)
(mpacts.geometrygenerators.cylinderpacking.CylinderPacking method)
(mpacts.geometrygenerators.hexagonalclosepacking.HexagonalClosePacking method)
RotateVectorCommand (class in mpacts.commands.geometry.orientation)
RotateVectorCommand() (RotateVectorCommand method)
RotateWithBiasCommand (class in mpacts.commands.geometry.orientation)
RotateWithBiasCommand() (RotateWithBiasCommand method)
rotation_for_alignment_along_inertia() (mpacts.geometrygenerators.meshobjects.MeshObject method)
RotationalDiffusionMatrixCommand (class in mpacts.commands.misc.frictionmatrices)
RotationalDiffusionMatrixCommand() (RotationalDiffusionMatrixCommand method)
RotationConstraint() (in module mpacts.boundaryconditions.rigid_body_constraints)
RouletteCommand (class in mpacts.commands.misc.lighttransport)
RouletteCommand() (RouletteCommand method)
Round (class in mpacts.core.expression_cpp)
round() (in module mpacts.core.expression)
Round() (Round method)
roundingRadius() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
run() (DEMutilities.start_parallel.SimulationThread method)
run_n() (DEMutilities.CheckpointedSimulation.CheckpointedSimulation method)
(mpacts.core.simulation.Simulation method)
run_until() (DEMutilities.CheckpointedSimulation.CheckpointedSimulation method)
(mpacts.core.simulation.Simulation method)
run_until_done() (mpacts.core.simulation.Simulation method)
running_mean() (in module DEMutilities.numeric_functions)
(in module mpacts.tools.arrayoperators)
running_mean2() (in module DEMutilities.numeric_functions)

S

S2_ContactDetectorBase (class in mpacts.contact.models.misc.s2detector)
S2_ContactDetectorBase() (S2_ContactDetectorBase method)
S2_ContactDetectorModel (class in mpacts.contact.models.misc.s2detector)
S2_ContactDetectorModel() (S2_ContactDetectorModel method)
S2_MGrid (class in mpacts.contact.models.misc.s2detector)
S2_MGrid() (S2_MGrid method)
S2_MultiGrid (class in mpacts.contact.models.misc.s2detector)
S2_MultiGrid() (S2_MultiGrid method)
S2_MultiGridContactDetector() (in module mpacts.contact.detectors.s2_contactdetector)
safe_radius_volume_fill() (in module mpacts.geometrygenerators.pointgenerators)
SaffmanLiftForceCommand (class in mpacts.commands.force.body)
SaffmanLiftForceCommand() (SaffmanLiftForceCommand method)
same_as() (mpacts.core.new_units.Unit method)
sankey() (DEMutilities.postprocessing.representation.academic_representation.AcademicRepresentationSet method)
save() (DEMutilities.CheckpointedSimulation.CheckpointedSimulation method)
(DEMutilities.postprocessing.representation.default_representation.RepresentationSet method)
(in module mpacts.io.save_load)
save_a_cs() (DEMutilities.CheckpointedSimulation.CheckpointedSimulation method)
save_a_pc() (DEMutilities.CheckpointedSimulation.CheckpointedSimulation method)
save_obj() (in module mpacts.io.savefiles)
save_off() (in module mpacts.io.savefiles)
save_oldDEMeter() (in module mpacts.io.savefiles)
save_stl() (in module mpacts.io.savefiles)
save_tri_vtp() (in module mpacts.io.savefiles)
SaveCommand (class in mpacts.io.save_load)
SaveCommand() (SaveCommand method)
savefig() (DEMutilities.postprocessing.plottools.mplsphereplotter.SpherePlotter method)
(DEMutilities.postprocessing.representation.academic_representation.AcademicRepresentationSet method)
(DEMutilities.postprocessing.representation.representationbase.RepresentationSetBase method)
ScalarArrayToRegularFullGridCommand (class in mpacts.commands.geometry.regulargrid)
ScalarArrayToRegularFullGridCommand() (ScalarArrayToRegularFullGridCommand method)
ScalarArrayToRegularSparseGridCommand (class in mpacts.commands.geometry.regulargrid)
ScalarArrayToRegularSparseGridCommand() (ScalarArrayToRegularSparseGridCommand method)
ScalarProperty (class in mpacts.core.valueproperties)
ScalarProperty() (ScalarProperty method)
ScalarValue (class in mpacts.core.expression_cpp)
ScalarValue() (ScalarValue method)
scale() (DEMutilities.postprocessing.h5storage.H5DataSection method)
(DEMutilities.postprocessing.h5storage.H5Entry method)
(in module mpacts.geometrygenerators.transformations)
(mpacts.geometrygenerators.meshobjects.MeshObject method)
scale_cmap() (in module DEMutilities.postprocessing.representation.cmap_tools)
scale_colors() (in module DEMutilities.postprocessing.representation.cmap_tools)
ScaleConverter (class in mpacts.core.units.converters)
ScaleConverter() (ScaleConverter method)
scaleVertices() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
(mpacts.geometrygenerators.trianglegeometries.UnitIcoSphere method)
(mpacts.geometrygenerators.trianglegeometries.UnitIcosahedron method)
scaleVerticesXYZ() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
scan_for_state() (DEMutilities.CheckpointedSimulation.CheckpointedSimulation method)
scatter() (DEMutilities.postprocessing.representation.academic_representation.AcademicRepresentationSet method)
ScatterCommand (class in mpacts.commands.misc.lighttransport)
ScatterCommand() (ScatterCommand method)
ScatterLayerCommand (class in mpacts.commands.misc.lighttransport)
ScatterLayerCommand() (ScatterLayerCommand method)
ScatterSphereCommand (class in mpacts.commands.misc.lighttransport)
ScatterSphereCommand() (ScatterSphereCommand method)
searchsorted() (mpacts.core.units.quantity._Quantity method)
SegmentClusters() (DEMutilities.postprocessing.analysistools.spatial.clusters.ClusterAnalysis method)
SegmentedAnalysisReader (class in DEMutilities.postprocessing.operators.operators)
SegmentedAnalysisReader() (SegmentedAnalysisReader method)
select_all() (mpacts.io.vtk_writer.VTKSerialWriter method)
sensible_axis_limits() (in module DEMutilities.postprocessing.representation.academic_representation)
SerialEncoderDecoder (class in mpacts.io.serial_encoder_decoder)
(class in mpacts.io.serial_encoder_decoder_new)
SerialEncoderDecoder() (SerialEncoderDecoder method), [1]
serialise_data() (in module mpacts.io.datasave)
(in module mpacts.io.datasave_new)
(in module mpacts.io.save_load)
set() (mpacts.core.baseobject.BaseObject method)
set_array() (DEMutilities.postprocessing.analysistools.spatial.structurefactor.StructureFactor method)
(mpacts.core.arrays.Array method)
set_arrayvalue() (mpacts.core.particle.Particle method)
set_attr() (DEMutilities.postprocessing.h5storage.H5BaseEntry method)
set_attrs() (DEMutilities.postprocessing.dataview.DataView method)
(DEMutilities.postprocessing.h5storage.H5DataSection method)
(DEMutilities.postprocessing.h5storage.H5Entry method)
set_bin_edges() (DEMutilities.postprocessing.analysistools.spatial.rdf.RadialDistributionFunction method)
set_cell() (mpacts.core.mesh.MeshBase method)
set_child_predicate() (mpacts.predicates.predicates.PredicateBase method)
set_cmap() (DEMutilities.postprocessing.plottools.mplsphereplotter.SpherePlotter method)
set_collection() (mpacts.core.particle.ParticleCollection method)
set_contact() (mpacts.core.contactdata.ContactDataBase method)
set_data() (DEMutilities.postprocessing.analysistools.spatial.countcontacts.CountContactSpheres method)
(DEMutilities.postprocessing.analysistools.spatial.countcontacts.CountContactsWithMesh method)
(DEMutilities.postprocessing.h5storage.H5Entry method)
set_element() (mpacts.core.arrays.Array method)
set_existing_child_in_dict() (in module mpacts.io.save_load)
set_gate_on_cmd() (in module mpacts.tools.gateparse)
set_lims() (DEMutilities.postprocessing.plottools.mplsphereplotter.SpherePlotter method)
set_local_index (mpacts.particles.particlebase.ParticleBase attribute)
set_mpacts_random_seed() (in module mpacts.tools.random_seed)
set_normal() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
set_numpy_random_seed() (in module mpacts.tools.random_seed)
set_parent_index (mpacts.particles.particlebase.ParticleBase attribute)
set_particles() (mpacts.particles.particlecontainer.ParticleContainer method)
set_positions() (DEMutilities.postprocessing.analysistools.spatial.rdf.RadialDistributionFunction method)
set_properties() (mpacts.tools.pyProperties.pyProperties method)
set_properties_from_dict() (in module DEMutilities.enumerate_properties)
set_python_random_seed() (in module mpacts.tools.random_seed)
set_random_seed() (in module mpacts.tools.random_seed)
set_slice() (mpacts.io.datareader.DataReader method)
(mpacts.io.datasave_new.DataReader method)
set_step() (mpacts.io.csv_read.CSV_State method)
(mpacts.io.np_read.SimpleState method)
(mpacts.io.vtp_read.VTP_State method)
(mpacts.io.vtu_read.VtuState method)
set_time() (mpacts.io.vtp_read.VTP_State method)
set_time_per_output() (mpacts.io.readerstatebase.ReaderStateBase method)
set_timestep() (mpacts.core.simulation.Simulation method)
set_unit() (mpacts.core.propertybase.PropertyBase method)
set_value() (mpacts.core.baseobject.BaseObject method)
(mpacts.core.valueproperties.VariableFunction method)
set_with_dict() (mpacts.core.baseobject.BaseObject method)
SetActiveParticles (class in mpacts.commands.onparticles.setactive)
SetActiveParticles() (SetActiveParticles method)
SetActiveParticlesBasedOnParent (class in mpacts.commands.onparticles.setactive)
SetActiveParticlesBasedOnParent() (SetActiveParticlesBasedOnParent method)
SetBoundarySegmentProperties (class in mpacts.commands.continuum.sph_eos)
SetBoundarySegmentProperties() (SetBoundarySegmentProperties method)
setCenter() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
SetContactDataStorage() (in module mpacts.tools.setcontactdatastorage)
SetData() (DEMutilities.postprocessing.analysistools.spatial.clusters.ClusterAnalysis method)
setData() (mpacts.geometrygenerators.trianglegeometries.UnitIcosahedron method)
(mpacts.geometrygenerators.trianglegeometries.UnitIcoSphere method)
SetMeanToOriginCommand (class in mpacts.commands.onarrays.setvalue)
SetMeanToOriginCommand() (SetMeanToOriginCommand method)
SetValueCommand (class in mpacts.commands.onarrays.setvalue)
SetValueCommand() (SetValueCommand method)
setVertex() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
shape (mpacts.core.units.quantity._Quantity attribute)
SharedRegistryObject (class in mpacts.core.units.util)
SharedRegistryObject() (SharedRegistryObject method)
Shepard_Filter (class in mpacts.commands.continuum.sph_eos)
Shepard_Filter() (Shepard_Filter method)
shift() (DEMutilities.postprocessing.h5storage.H5DataSection method)
(DEMutilities.postprocessing.h5storage.H5Entry method)
ShortProgressPrinter (class in mpacts.commands.monitors.progress)
ShortProgressPrinter() (ShortProgressPrinter method)
show() (DEMutilities.postprocessing.plottools.mplsphereplotter.SpherePlotter method)
(DEMutilities.postprocessing.representation.default_representation.RepresentationSet method)
(DEMutilities.postprocessing.representation.representationbase.RepresentationSetBase method)
shuffle() (in module DEMutilities.lhs_samples)
shuffle_indices() (in module mpacts.geometrygenerators.polyhedron)
Sign (class in mpacts.core.expression_cpp)
sign() (in module mpacts.core.expression)
Sign() (Sign method)
SimpleState (class in mpacts.io.np_read)
SimpleState() (SimpleState method)
SimpleStokesDragCommand (class in mpacts.contact.matrix.cmtypes)
SimpleStokesDragCommand() (SimpleStokesDragCommand method)
simpleWriter (class in mpacts.io.simple_writer)
simpleWriter() (simpleWriter method)
simplify_mesh() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
Simulation (class in mpacts.core.simulation)
Simulation() (in module DEMutilities.GUI.Simulation)
simulation() (mpacts.boundaryconditions.ghostpc.GhostParticleManager method)
Simulation() (Simulation method)
simulation_completed() (DEMutilities.postprocessing.h5storage.H5Storage method)
SimulationThread (class in DEMutilities.start_parallel)
SimulationThread() (SimulationThread method)
single_value() (DEMutilities.postprocessing.representation.default_representation.RepresentationSet method)
single_value_only() (DEMutilities.postprocessing.representation.default_representation.RepresentationSet method)
SingleFraction() (DEMutilities.postprocessing.analysistools.spatial.clusters.ClusterAnalysis method)
siunitx_format_unit() (in module mpacts.core.units.formatting)
size() (DEMutilities.postprocessing.operators.operators.OperatorBase method)
(mpacts.contact.matrix.cmtypes.CG_Matrix_Iface method)
(mpacts.contact.matrix.cmtypes.CG_Vector_Iface method)
(mpacts.core.arrays.Array method)
(mpacts.core.arrays.ArrayManager method)
(mpacts.core.particle.ParticleCollection method)
slice_near_value() (DEMutilities.postprocessing.dataview.DataView method)
SmartBruteForce (class in mpacts.contact.detectors.bruteforce)
SmartBruteForce() (SmartBruteForce method)
smooth_image() (in module DEMutilities.postprocessing.representation.academic_representation)
solve_dependencies() (in module mpacts.core.units.util)
sort_parentparticles_to_axis() (in module DEMutilities.particle_initialisation)
sort_vertices_along_axis() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
SortTriangleIndexListCommand (class in mpacts.commands.geometry.triangle)
SortTriangleIndexListCommand() (SortTriangleIndexListCommand method)
SourceIterator (class in mpacts.core.units.util)
SourceIterator() (SourceIterator method)
SPH_Boundary_Contact_LineDistance (class in mpacts.commands.continuum.sph_eos)
SPH_Boundary_Contact_LineDistance() (SPH_Boundary_Contact_LineDistance method)
SPH_Boundary_Contact_LineDistance_Solid (class in mpacts.commands.continuum.sph_eos)
SPH_Boundary_Contact_LineDistance_Solid() (SPH_Boundary_Contact_LineDistance_Solid method)
SPH_dBoundNorm_Integration (class in mpacts.commands.continuum.sph_eos)
SPH_dBoundNorm_Integration() (SPH_dBoundNorm_Integration method)
SPH_dBoundNorm_Integration_moving_wall (class in mpacts.commands.continuum.sph_eos)
SPH_dBoundNorm_Integration_moving_wall() (SPH_dBoundNorm_Integration_moving_wall method)
SPH_Degradation (class in mpacts.commands.continuum.sph_eos)
SPH_Degradation() (SPH_Degradation method)
SPH_Degradation_Deformable (class in mpacts.commands.continuum.sph_eos)
SPH_Degradation_Deformable() (SPH_Degradation_Deformable method)
SPH_Degradation_Deformable_Matrix (class in mpacts.commands.continuum.sph_eos)
SPH_Degradation_Deformable_Matrix() (SPH_Degradation_Deformable_Matrix method)
SPH_Free_Boundary_Correction (class in mpacts.commands.continuum.sph_eos)
SPH_Free_Boundary_Correction() (SPH_Free_Boundary_Correction method)
SPH_Set_Filopodia_Force (class in mpacts.commands.continuum.sph_eos)
SPH_Set_Filopodia_Force() (SPH_Set_Filopodia_Force method)
SPH_Set_Protrusive_Force_Angle (class in mpacts.commands.continuum.sph_eos)
SPH_Set_Protrusive_Force_Angle() (SPH_Set_Protrusive_Force_Angle method)
SPH_SetWallProperties (class in mpacts.commands.continuum.sph_eos)
SPH_SetWallProperties() (SPH_SetWallProperties method)
SphereDiffusionInPlaneMatrixCommand (class in mpacts.commands.misc.frictionmatrices)
SphereDiffusionInPlaneMatrixCommand() (SphereDiffusionInPlaneMatrixCommand method)
SphereDiffusionInWaterMatrixCommand (class in mpacts.commands.misc.frictionmatrices)
SphereDiffusionInWaterMatrixCommand() (SphereDiffusionInWaterMatrixCommand method)
SphereDiffusionMatrixCommand (class in mpacts.commands.misc.frictionmatrices)
SphereDiffusionMatrixCommand() (SphereDiffusionMatrixCommand method)
SpherePlotter (class in DEMutilities.postprocessing.plottools.mplsphereplotter)
SpherePlotter() (SpherePlotter method)
Spheres (class in mpacts.sparkicles.layoutcreator)
Spheres() (Spheres method)
spheres_in_cone() (in module mpacts.geometrygenerators.pointgenerators)
spheres_in_cone_HighNumber() (in module mpacts.geometrygenerators.pointgenerators)
spheres_in_cube() (in module mpacts.geometrygenerators.pointgenerators)
spheres_in_cube_HighNumber() (in module mpacts.geometrygenerators.pointgenerators)
spheres_in_cylinder() (in module mpacts.geometrygenerators.pointgenerators)
spheres_in_cylinder_HighNumber() (in module mpacts.geometrygenerators.pointgenerators)
spheres_in_disk() (in module mpacts.geometrygenerators.pointgenerators)
spheres_in_ring() (in module mpacts.geometrygenerators.pointgenerators)
spheres_in_sphere() (in module mpacts.geometrygenerators.pointgenerators)
spheres_on_sphere() (in module mpacts.geometrygenerators.pointgenerators)
SPHFocalAdhesionCommand (class in mpacts.commands.misc.lamellipodiumfront)
SPHFocalAdhesionCommand() (SPHFocalAdhesionCommand method)
SPHFocalAdhesionDeflectionCommand (class in mpacts.commands.misc.lamellipodiumfront)
SPHFocalAdhesionDeflectionCommand() (SPHFocalAdhesionDeflectionCommand method)
SPHFocalAdhesionDeflectionNoBreakingCommand (class in mpacts.commands.misc.lamellipodiumfront)
SPHFocalAdhesionDeflectionNoBreakingCommand() (SPHFocalAdhesionDeflectionNoBreakingCommand method)
SPHFocalAdhesionForceCommand (class in mpacts.commands.misc.lamellipodiumfront)
SPHFocalAdhesionForceCommand() (SPHFocalAdhesionForceCommand method)
SPHProtrusionCommand (class in mpacts.commands.misc.lamellipodiumfront)
SPHProtrusionCommand() (SPHProtrusionCommand method)
split_stl_solids() (in module mpacts.io.savefiles)
SplitCapsuleCommand (class in mpacts.commands.misc.splitcapsule)
SplitCapsuleCommand() (SplitCapsuleCommand method)
StandardDeviationEstimator (class in DEMutilities.postprocessing.operators.operators)
StandardDeviationEstimator() (DEMutilities.postprocessing.operators.operators.AnalysisContainer method)
(StandardDeviationEstimator method)
start_parallel() (in module DEMutilities.start_parallel)
std() (in module mpacts.tools.arrayoperators)
StepComplete (class in mpacts.predicates.lighttransport_predicates)
StepComplete() (StepComplete method)
SteppingForwardEuler (class in mpacts.commands.time_evolution.integration)
SteppingForwardEuler() (SteppingForwardEuler method)
StepPrinter (class in mpacts.commands.monitors.progress)
StepPrinter() (StepPrinter method)
StochasticProcessCommand (class in mpacts.commands.misc.stochastic_switch)
StochasticProcessCommand() (StochasticProcessCommand method)
StochasticSwitchCommand (class in mpacts.commands.misc.stochastic_switch)
StochasticSwitchCommand() (StochasticSwitchCommand method)
StochasticSwitchGillespieCommand (class in mpacts.commands.misc.stochastic_switch)
StochasticSwitchGillespieCommand() (StochasticSwitchGillespieCommand method)
StokesDragForceCommand (class in mpacts.commands.force.body)
StokesDragForceCommand() (StokesDragForceCommand method)
StokesDragForceFluidFeedbackCommand (class in mpacts.commands.force.body)
StokesDragForceFluidFeedbackCommand() (StokesDragForceFluidFeedbackCommand method)
StopTokenizing (class in mpacts.core.units.compat.tokenize)
StopTokenizing() (StopTokenizing method)
StopWhenPcEmptyCommand (class in mpacts.commands.monitors.checkpredicate)
StopWhenPcEmptyCommand() (StopWhenPcEmptyCommand method)
StopWhenPredicateAllCommand (class in mpacts.commands.monitors.checkpredicate)
StopWhenPredicateAllCommand() (StopWhenPredicateAllCommand method)
StopWhenPredicateAnyCommand (class in mpacts.commands.monitors.checkpredicate)
StopWhenPredicateAnyCommand() (StopWhenPredicateAnyCommand method)
store_parameters() (DEMutilities.postprocessing.h5storage.H5Storage method)
store_pc_per_parent_particle() (in module DEMutilities.particle_initialisation)
StoreIndexCommand (class in mpacts.commands.monitors.checkpredicate)
StoreIndexCommand() (StoreIndexCommand method)
StoreNeighbourTrianglesCommand (class in mpacts.commands.geometry.triangle)
StoreNeighbourTrianglesCommand() (StoreNeighbourTrianglesCommand method)
StoreUnscatteredTransmittanceCommand (class in mpacts.commands.misc.lighttransport)
StoreUnscatteredTransmittanceCommand() (StoreUnscatteredTransmittanceCommand method)
StrawBreakCommand (class in mpacts.commands.misc.strawbreak)
StrawBreakCommand() (StrawBreakCommand method)
StrawBreakForceTHCommand (class in mpacts.commands.misc.strawbreak)
StrawBreakForceTHCommand() (StrawBreakForceTHCommand method)
StressInPlaneCommand (class in mpacts.commands.continuum.stress)
StressInPlaneCommand() (StressInPlaneCommand method)
StressModulatedGrowthCommand (class in mpacts.commands.misc.cellcycle)
StressModulatedGrowthCommand() (StressModulatedGrowthCommand method)
strfmt() (in module DEMutilities.postprocessing.representation.academic_representation)
string_preprocessor() (in module mpacts.core.units.util)
StringProperty (class in mpacts.core.valueproperties)
StringProperty() (StringProperty method)
StringToDictTransformer (class in DEMutilities.variables_from_files)
StringToDictTransformer() (StringToDictTransformer method)
StructureFactor (class in DEMutilities.postprocessing.analysistools.spatial.structurefactor)
StructureFactor() (StructureFactor method)
subdiv_vertices_edges() (in module mpacts.geometrygenerators.subdivide)
subdivide() (in module mpacts.geometrygenerators.subdivide)
(mpacts.geometrygenerators.meshobjects.MeshObject method)
(mpacts.geometrygenerators.polyhedron.Polyhedron method)
(mpacts.geometrygenerators.trianglegeometries.UnitHexagon method)
subparticle_count() (mpacts.core.indextranslator.IndexTranslator method)
Substract (class in mpacts.core.expression_cpp)
Substract() (Substract method)
subtract_from() (mpacts.contact.matrix.cmoperators.ContactMatrixOperatorsBase method)
sum() (in module mpacts.tools.arrayoperators)
SumArrayToParentCommand (class in mpacts.commands.onarrays.transfer)
SumArrayToParentCommand() (SumArrayToParentCommand method)
SumToDiagonalCommand (class in mpacts.contact.matrix.cmtypes)
SumToDiagonalCommand() (SumToDiagonalCommand method)
SuperContactDetectorAABB (class in mpacts.contact.detectors.supercontactdetector)
SuperContactDetectorAABB() (SuperContactDetectorAABB method)
SuperSymmetric_np_matrix() (in module mpacts.contact.matrix.pythontools)
surface_area() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
SurfaceElementDragForceCommand (class in mpacts.commands.force.body)
SurfaceElementDragForceCommand() (SurfaceElementDragForceCommand method)
SweepAndPruneContactDetector (class in mpacts.contact.detectors.sweepandprune)
(class in mpacts.contact.detectors.sweepandprune_cd)
SweepAndPruneContactDetector() (SweepAndPruneContactDetector method), [1]
SwitchContactDataStorage() (in module mpacts.tools.setcontactdatastorage)
SwitchContactDataStorageSimulation() (in module mpacts.tools.setcontactdatastorage)
sym() (mpacts.core.new_units.QuantityMatrix method)
(mpacts.core.new_units.QuantitySymmetricMatrix method)
symbol (mpacts.core.units.definitions.Definition attribute)
Symmetric_3x3_to_np_matrix() (in module mpacts.contact.matrix.pythontools)
SymmetricMatrixProperty (class in mpacts.core.valueproperties)
SymmetricMatrixProperty() (SymmetricMatrixProperty method)
system_architecture() (in module mpacts.tools.system_info)
system_cpu_info() (in module mpacts.tools.system_info)
system_libc_version() (in module mpacts.tools.system_info)
system_linux_distribution() (in module mpacts.tools.system_info)
system_node_name() (in module mpacts.tools.system_info)
system_os_family() (in module mpacts.tools.system_info)
system_python_implementation() (in module mpacts.tools.system_info)
system_python_version() (in module mpacts.tools.system_info)
system_release() (in module mpacts.tools.system_info)
systems (mpacts.core.units.unit._Unit attribute)

T

T (mpacts.core.units.quantity._Quantity attribute)
T() (mpacts.core.new_units.QuantityMatrix method)
(mpacts.core.new_units.QuantitySymmetricMatrix method)
tabulate() (DEMutilities.postprocessing.representation.academic_representation.AcademicRepresentationSet method)
TensionInPlaneCommand (class in mpacts.commands.continuum.tension)
TensionInPlaneCommand() (TensionInPlaneCommand method)
test() (in module DEMutilities.lhs_samples)
(in module DEMutilities.start_parallel)
(in module mpacts.geometrygenerators.cylinderpacking)
(in module mpacts.geometrygenerators.polyhedron)
(in module mpacts.io.savefiles)
(mpacts.geometrygenerators.hexagonalclosepacking.HexagonalClosePacking method)
test_A1() (DEMutilities.determine_hertz_dissipative_coefficient.A_Determinator method)
test_inertia() (in module mpacts.geometrygenerators.trianglegeometries)
test_tim() (in module mpacts.geometrygenerators.trianglegeometries)
TestLoopCommand_Alive (class in mpacts.commands.monitors.testloop)
TestLoopCommand_Alive() (TestLoopCommand_Alive method)
TestLoopCommand_Default (class in mpacts.commands.monitors.testloop)
TestLoopCommand_Default() (TestLoopCommand_Default method)
TestLoopCommand_Everything (class in mpacts.commands.monitors.testloop)
TestLoopCommand_Everything() (TestLoopCommand_Everything method)
TestLoopCommand_WithArray_Alive (class in mpacts.commands.monitors.testloop)
TestLoopCommand_WithArray_Alive() (TestLoopCommand_WithArray_Alive method)
TestLoopCommand_WithArray_Default (class in mpacts.commands.monitors.testloop)
TestLoopCommand_WithArray_Default() (TestLoopCommand_WithArray_Default method)
TestLoopCommand_WithArray_Everything (class in mpacts.commands.monitors.testloop)
TestLoopCommand_WithArray_Everything() (TestLoopCommand_WithArray_Everything method)
ThermalForceCommand (class in mpacts.commands.force.random)
ThermalForceCommand() (ThermalForceCommand method)
threshold_colors() (in module DEMutilities.postprocessing.representation.cmap_tools)
TimedCommandList (class in mpacts.core.command)
TimedCommandList() (TimedCommandList method)
TimeGetter() (in module DEMutilities.data_over_time)
TimeIntervalCondition (class in mpacts.commands.monitors.progress)
TimeIntervalCondition() (TimeIntervalCondition method)
title() (DEMutilities.postprocessing.representation.representationbase.RepresentationSetBase method)
tmpKeeper (class in mpacts.commands.geometry.curvature)
tmpKeeper() (tmpKeeper method)
to() (mpacts.core.new_units.QuantityBase method)
(mpacts.core.units.quantity._Quantity method)
to_base_units() (mpacts.core.units.quantity._Quantity method)
to_compact() (mpacts.core.units.quantity._Quantity method)
to_json() (mpacts.io.serial_encoder_decoder.ArrayDataSaver method)
(mpacts.io.serial_encoder_decoder_new.ArrayDataSaver method)
to_reference() (mpacts.core.units.converters.Converter method)
(mpacts.core.units.converters.OffsetConverter method)
(mpacts.core.units.converters.ScaleConverter method)
to_root_units() (mpacts.core.units.quantity._Quantity method)
to_string() (mpacts.core.units.units_eval.EvalTreeNode method)
to_tuple() (mpacts.core.units.quantity._Quantity method)
to_units_container() (in module mpacts.core.units.util)
ToggleGate (class in mpacts.core.command)
ToggleGate() (ToggleGate method)
TokenError (class in mpacts.core.units.compat.tokenize)
TokenError() (TokenError method)
TokenInfo (class in mpacts.core.units.compat.tokenize)
TokenInfo() (TokenInfo method)
tokenize() (in module mpacts.core.units.compat.tokenize)
tolist() (mpacts.core.arrays.Array method)
(mpacts.core.units.quantity._Quantity method)
toString() (mpacts.core.unit.Unit method)
trace() (mpacts.core.new_units.QuantityMatrix method)
(mpacts.core.new_units.QuantitySymmetricMatrix method)
TrackParentPositionCommand (class in mpacts.commands.onarrays.transfer)
TrackParentPositionCommand() (TrackParentPositionCommand method)
TrackParentPositionCommand_Triangle (class in mpacts.commands.onarrays.transfer)
TrackParentPositionCommand_Triangle() (TrackParentPositionCommand_Triangle method)
TransferArrayFromParentToChild (class in mpacts.commands.onarrays.transfer)
TransferArrayFromParentToChild() (TransferArrayFromParentToChild method)
TransferControlPointsToParticleCommand (class in mpacts.commands.onarrays.transfer)
TransferControlPointsToParticleCommand() (TransferControlPointsToParticleCommand method)
TransferForcesToDofCommand (class in mpacts.commands.onarrays.transfer)
TransferForcesToDofCommand() (TransferForcesToDofCommand method)
TransferVelocityToControlPointsCommand (class in mpacts.commands.onarrays.transfer)
TransferVelocityToControlPointsCommand() (TransferVelocityToControlPointsCommand method)
transform() (mpacts.core.units.context.Context method)
TransformationReaction (class in mpacts.commands.misc.molecularreactions)
TransformationReaction() (TransformationReaction method)
TransformControlPointsCommand (class in mpacts.commands.geometry.transformcontrolpoints)
TransformControlPointsCommand() (TransformControlPointsCommand method)
transformer (DEMutilities.variables_from_files.VariableExtractor attribute)
TransformRigidBodyCommand (class in mpacts.commands.geometry.transformcontrolpoints)
TransformRigidBodyCommand() (TransformRigidBodyCommand method)
translate() (in module mpacts.geometrygenerators.transformations)
(mpacts.geometrygenerators.meshobjects.MeshObject method)
translate_cmap() (in module DEMutilities.postprocessing.representation.cmap_tools)
translate_colors() (in module DEMutilities.postprocessing.representation.cmap_tools)
translate_connectivity() (mpacts.core.particle.ParticleCollection method)
translate_global_to_local() (mpacts.particles.particlecontainer.ParticleContainer method)
translateObj() (mpacts.geometrygenerators.boolean3Dshapegenerator.Boolean3DShapeGenerator method)
(mpacts.geometrygenerators.hexagonalclosepacking.HexagonalClosePacking method)
TranslateParticlesCommand (class in mpacts.commands.onarrays.transfer)
TranslateParticlesCommand() (TranslateParticlesCommand method)
TranslationConstraint() (in module mpacts.boundaryconditions.rigid_body_constraints)
transpose() (in module mpacts.core.units.util)
(mpacts.core.new_units.QuantityMatrix method)
(mpacts.core.new_units.QuantitySymmetricMatrix method)
triangle_centers() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
triangle_inverse_curvatures() (in module mpacts.geometrygenerators.laplace_beltrami)
triangle_to_nodes() (mpacts.geometrygenerators.polyhedron.Connectivity method)
TriangleIndexValue (class in mpacts.core.expression_cpp)
TriangleIndexValue() (TriangleIndexValue method)
TriangleMeshObject (class in mpacts.geometrygenerators.meshobjects)
TriangleMeshObject() (TriangleMeshObject method)
triangles() (mpacts.geometrygenerators.meshobjects.TriangleMeshObject method)
triangles_from_edges() (in module mpacts.geometrygenerators.subdivide)
triangleToPlane() (mpacts.geometrygenerators.polyhedron.Polyhedron method)
tuple_from_dist() (in module mpacts.geometrygenerators.boolean3Dshapegenerator)

U

u (mpacts.core.units.quantity._Quantity attribute)
udict (class in mpacts.core.units.util)
udict() (udict method)
UnbindingReaction (class in mpacts.commands.misc.molecularreactions)
UnbindingReaction() (UnbindingReaction method)
UndefinedUnitError (class in mpacts.core.units.errors)
UndefinedUnitError() (UndefinedUnitError method)
uniform() (in module DEMutilities.lhs_samples)
UniformFrictionDiffusionMatrixCommand (class in mpacts.commands.misc.frictionmatrices)
UniformFrictionDiffusionMatrixCommand() (UniformFrictionDiffusionMatrixCommand method)
UniformTensionInPlaneCommand (class in mpacts.commands.continuum.membrane)
UniformTensionInPlaneCommand() (UniformTensionInPlaneCommand method)
unimplemented() (DEMutilities.postprocessing.representation.default_representation.RepresentationSet method)
(DEMutilities.postprocessing.representation.representationbase.RepresentationSetBase method)
union_aabb() (in module DEMutilities.fill_mesh)
Unit (class in mpacts.core.new_units)
(class in mpacts.core.unit)
unit() (mpacts.core.new_units.QuantityBase method)
Unit() (Unit method), [1]
unit_configuration() (in module mpacts.core.configuration)
unit_normal_triangle() (in module mpacts.core.geometrysupport)
UnitConfiguration (class in mpacts.core.configuration)
UnitConfiguration() (UnitConfiguration method)
UnitCube (class in mpacts.geometrygenerators.trianglegeometries)
UnitCube() (UnitCube method)
UnitDefinition (class in mpacts.core.units.definitions)
UnitDefinition() (UnitDefinition method)
UnitHexagon (class in mpacts.geometrygenerators.trianglegeometries)
UnitHexagon() (UnitHexagon method)
UnitIcosahedron (class in mpacts.geometrygenerators.trianglegeometries)
UnitIcosahedron() (UnitIcosahedron method)
UnitIcoSphere (class in mpacts.geometrygenerators.trianglegeometries)
UnitIcoSphere() (UnitIcoSphere method)
unitless (mpacts.core.units.quantity._Quantity attribute)
UnitRegister (class in mpacts.core.new_units)
UnitRegister() (UnitRegister method)
units (mpacts.core.units.quantity._Quantity attribute)
UnitTetrahedron (class in mpacts.geometrygenerators.trianglegeometries)
UnitTetrahedron() (UnitTetrahedron method)
UnitTriangle (class in mpacts.geometrygenerators.trianglegeometries)
UnitTriangle() (UnitTriangle method)
unmask() (mpacts.core.arrays.ArrayManager method)
unserialise_data() (in module mpacts.io.datareader)
(in module mpacts.io.datasave_new)
(in module mpacts.io.save_load)
untokenize() (in module mpacts.core.units.compat.tokenize)
UpdateRigidBodyRotationCommand (class in mpacts.commands.geometry.orientation)
UpdateRigidBodyRotationCommand() (UpdateRigidBodyRotationCommand method)
UpdateTorsionRotationCommand (class in mpacts.commands.geometry.orientation)
UpdateTorsionRotationCommand() (UpdateTorsionRotationCommand method)
UseConcept() (mpacts.core.conceptbase.ConceptBase method)

V

value (mpacts.core.new_units.Unit attribute)
(mpacts.core.units.measurement._Measurement attribute)
value() (DEMutilities.postprocessing.h5storage.H5Entry method)
(DEMutilities.postprocessing.representation.academic_representation.AcademicRepresentationSet method)
(mpacts.core.new_units.QuantityBase method)
(mpacts.core.smoothingkernels.CohesionSplineAkinci3D method)
(mpacts.core.smoothingkernels.CubicSpline2D method)
(mpacts.core.smoothingkernels.CubicSpline3D method)
(mpacts.core.smoothingkernels.IBM2D method)
(mpacts.core.smoothingkernels.IBM3D method)
(mpacts.core.smoothingkernels.QuinticSpline2D method)
(mpacts.core.smoothingkernels.QuinticSpline3D method)
(mpacts.core.smoothingkernels.Wendland2D method)
(mpacts.core.smoothingkernels.Wendland3D method)
value_SI() (mpacts.core.new_units.QuantityBase method)
Variable (class in mpacts.core.valueproperties)
Variable() (Variable method)
VariableExtractor (class in DEMutilities.variables_from_files)
VariableExtractor() (VariableExtractor method)
VariableFunction (class in mpacts.core.valueproperties)
VariableFunction() (VariableFunction method)
VariableHelper (class in DEMutilities.variable_helper)
VariableHelper() (VariableHelper method)
vector_to_latex() (in module mpacts.core.units.formatting)
VectorArrayToRegularSparseGridCommand (class in mpacts.commands.geometry.regulargrid)
VectorArrayToRegularSparseGridCommand() (VectorArrayToRegularSparseGridCommand method)
VectorProperty (class in mpacts.core.valueproperties)
VectorProperty() (VectorProperty method)
VectorValue (class in mpacts.core.expression_cpp)
VectorValue() (VectorValue method)
VerboseCommandList (class in mpacts.core.command)
VerboseCommandList() (VerboseCommandList method)
VerboseExecute (class in mpacts.core.command)
VerboseExecute() (VerboseExecute method)
verify_hash() (in module mpacts.tools.arrayhash)
vertices() (mpacts.geometrygenerators.meshobjects.MeshObject method)
visit_Name() (DEMutilities.variables_from_files.StringToDictTransformer method)
volume() (mpacts.geometrygenerators.meshobjects.MeshObject method)
(mpacts.geometrygenerators.polyhedron.Polyhedron method)
VolumeConservation() (in module mpacts.commands.force.constraints.volumeconservation)
VolumeRegulation() (in module mpacts.commands.force.constraints.volumeregulation)
voronoi_area_vertex0_triangle() (in module mpacts.geometrygenerators.laplace_beltrami)
VTKSerialWriter (class in mpacts.io.vtk_writer)
VTKSerialWriter() (VTKSerialWriter method)
VTP_State (class in mpacts.io.vtp_read)
VTP_State() (VTP_State method)
VtuState (class in mpacts.io.vtu_read)
VtuState() (VtuState method)

W

Wendland2D (class in mpacts.core.smoothingkernels)
Wendland2D() (Wendland2D method)
Wendland3D (class in mpacts.core.smoothingkernels)
Wendland3D() (Wendland3D method)
with_metaclass() (in module mpacts.core.units.compat.meta)
wraps() (in module mpacts.core.units.registry_helpers)
Write() (DEMutilities.postprocessing.analysistools.spatial.clusters.ClusterAnalysis method)
write() (mpacts.geometrygenerators.hexagonalclosepacking.HexagonalClosePacking method)
write_pos_freefem() (in module mpacts.io.savefiles)
write_results_table() (in module DEMutilities.analyze_parameter_study)
write_sol() (in module mpacts.io.savefiles)

X

XOR() (in module mpacts.predicates.shortened_predicates)
xydata() (DEMutilities.postprocessing.representation.default_representation.RepresentationSet method)
xyerrorbar() (DEMutilities.postprocessing.representation.default_representation.RepresentationSet method)

Y

ydata() (DEMutilities.postprocessing.representation.default_representation.RepresentationSet method)